Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03160 ATGTTTCAGTCCAAGCGTATGCCAGCGAACAATTATAACTGCATCCCTTTAACACCAAGGTCTAGATTGGAAAGGCTTCTGAGGGAAAGGGAGCTAAGGAAGTCCTTCAAGAATACTCAACCAACTGATGAAGCAAGAGATGGCAACAAAGAGGGAGAACAATGTTCTGGTGATTCAAGCATAAGTGAGAAAGAAATTTCAGGTGTTTATAAGGAGGAAGAGGCCACGGAAACGAATAGGCAAGATGAGAGGCCAAGCAAACAACGTTTGTTGGTGGTAGCTAACAGGTTGCCAGTGTCTGCTGTAAGAGATGGTGTGGAGTCATATAATCTTGAGATCAGTGTAGGCGGGCTAGTCAGTGCACTTCTAGGCAAGAAAAATGAAGGTTGTATGAAGCTTGTTGTTTCTGTTGAAGGTGTAAAGGAGTTTGATACCAGATGGATTGGGTGGGCTGGCGTGAATGTGCCTGATGATGTTGGACGGAGAGCATTGACTAAAGCTTTGGCTGAAATGCGATGTATTCCAGTATTTCTTGATGAGGAGATAGTTAATCAGTACTATAATGGCTACTGCAACAACATCTTATGGCCTCTATTTCATTACCTTGGGCTTCCACAAGAAGATCGACTTGCTACCACTCGTACTTTCCAATCCCAATTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTGGTAAATAAGCATTATGAGGAAGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTCCTTCCAAAATGTTTAAAAGAACGCAATGACAAAATGAAAGTTGGTTGGTTTCTCCATACACCCTTTCCTTCCTCCGAAATACATAGGACTCTACCATCCAGATCAGAGCTGTTGAGATCTGTTCTTGAAGCTGACTTGGTGGGATTCCATACCTATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGTATTCTTGGGCTTGAGGGAACACCTGACGGAGTAGAAGATCGAGGGAAGCTAACCCGTTGTGAAACTTCAGTTTCCTATTGGAATTGA 1038 0.4258 MFQSKRMPANNYNCIPLTPRSRLERLLRERELRKSFKNTQPTDEARDGNKEGEQCSGDSSISEKEISGVYKEEEATETNRQDERPSKQRLLVVANRLPVSAVRDGVESYNLEISVGGLVSALLGKKNEGCMKLVVSVEGVKEFDTRWIGWAGVNVPDDVGRRALTKALAEMRCIPVFLDEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRTFQSQFDAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKERNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLEADLVGFHTYDYARHFVSACTRILGLEGTPDGVEDRGKLTRCETSVSYWN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03160 345 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 76 338 IPR001830 GO:0003824|GO:0005992
Lapu3g03160 345 MobiDBLite consensus disorder prediction 65 86 - -
Lapu3g03160 345 MobiDBLite consensus disorder prediction 32 86 - -
Lapu3g03160 345 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 334 - -
Lapu3g03160 345 MobiDBLite consensus disorder prediction 32 53 - -
Lapu3g03160 345 Pfam Glycosyltransferase family 20 89 337 IPR001830 GO:0003824|GO:0005992
Lapu3g03160 345 Gene3D Glycogen Phosphorylase B; 76 342 - -
Lapu3g03160 345 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 81 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03160 Lapu-Chr3 54947516 54968701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03160 7 337 Trehalose Biosynthesis Gene Families AT1G78580 72.093 1.45e-162 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03160 K16055 - gmx:100816642 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03160 3 54947516 54968701 Lapu3g03160 3 54947516 54968701 ECH