Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03159 ATGAAAGAACTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGTGTCGATCGTCTTGATATGATAAAAGGAATTCCTCAGAAAATATTGGCATTTGAAAAGTTCCTCGAGGAGAATTCACACTGGCGTGATAAAGTTGTCTTGCTGCAGATTGCTGTACCTACTAGAAAAGATGTTCCTGAATACCAAAAGCTTGCAAGCCAAGTGCATGAGATTGTAGGACGCATCAATGGAAGATTTGGAACACTTACAGCTGTTCCAATACACCATCTGGATCGATCACTCGACTTTCATGAATTATGTGCACTCTATGCTGTAACTGACGTCGCACTTGTTACATCATTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGTCAAGCATCCAAGAAAGGGGTTCTCATCTTAAGTGAGTTTGCAGGTGCAGCTCAGTCTCTCGGTGCTGGTGCTATCTTGGTAAATCCATGGAACATTACAGAGGTTGCTGCTTCTATTGGTTATGCATTGGATATGCCAGCTGACGAAAGAGAAAAACGGCATCAGTTTAATTTCAAACATGTGAAGACTCACACATCACAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGATCCTCCATTGCTTCCCAACAAAGTGGCAGTTGACTGTTACTCAAAATCCAATAACCGATTAATCATACTGGGTTTCAATGCCACTTTGACTGAACCAGTGGATGCCCTTGGAAGGGCTGGTCAAATTAGAGAACTGGAACTTAAATTACACCCAAATCTGAAGGAACCTTTAAAGAAATTATCCGAAGATCCACAGACAACAATAGTACTTCTCAGTGGGAGCAATCGAGCAGTCCTGGACAAAAACTTCAGTGAATTTAATATGTGGTTGGCAGCGGAAAATGGGATGTTTTTGCGACTCACTTCAAGTGAGTGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGCGTGAAGCATGTTTTTGAGTATTTTACTGAAAGAACTCCACGGTCCCATTTTGAGCTTAGGGAGACTTCAATAGTATGGAATTACAAGTATGCAGATGTTGAATTTGGAAGGATTCAAGCAAGAGATTTGCTTCAGCATCTTTGGACAGGACCAATATCAAATGCATCTCTTGATGTTTTCCAAGGTGGTCGATCAGTTGAGGTGCGCACAGTTGGCGTGTCAAAGGATGAAGATGTGTACAAATTTTTTGAGCCAGAGCTCCCTTGTGAATCACCTCCAGTACCAAGAGCTATGCTATCCAAATCCAATTCATACAGACCATCATCAGTGCCAAAATTTACAGTCAGCAAAGCCAGTAAGGCAGCTCAGTACAAGAAACAACGTTCCTTGTCGAACATAGAAAAGAGAGAAATTGAACAACTGAGACCAACATATCGTGATAAAACATCACTGCATGAGGGTTCCTCAGTGCTTGACCTAAAAGGTGATAATTACTTCTCTTGTGTAGTTGGACGGAAAAGATCAAGTGCACGTTACCTCCTTAAAACCTCAGATGATGTTATCAACCTCTTAAGTGATTTGGCAGAACATTCTTCATCAACAACTTAG 1632 0.4124 MKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRKDVPEYQKLASQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVKTHTSQEWAATFVSELNDTIVEAQLRTRQDPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDALGRAGQIRELELKLHPNLKEPLKKLSEDPQTTIVLLSGSNRAVLDKNFSEFNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSIVWNYKYADVEFGRIQARDLLQHLWTGPISNASLDVFQGGRSVEVRTVGVSKDEDVYKFFEPELPCESPPVPRAMLSKSNSYRPSSVPKFTVSKASKAAQYKKQRSLSNIEKREIEQLRPTYRDKTSLHEGSSVLDLKGDNYFSCVVGRKRSSARYLLKTSDDVINLLSDLAEHSSSTT* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03159 543 Pfam Trehalose-phosphatase 267 423 IPR003337 GO:0003824|GO:0005992
Lapu3g03159 543 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 211 - -
Lapu3g03159 543 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 537 IPR001830 GO:0003824|GO:0005992
Lapu3g03159 543 Gene3D Glycogen Phosphorylase B; 1 193 - -
Lapu3g03159 543 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 1 193 - -
Lapu3g03159 543 FunFam Alpha,alpha-trehalose-phosphate synthase 266 337 - -
Lapu3g03159 543 Pfam Glycosyltransferase family 20 1 208 IPR001830 GO:0003824|GO:0005992
Lapu3g03159 543 SUPERFAMILY HAD-like 240 423 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03159 Lapu-Chr3 54947516 54968701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03159 1 541 Trehalose Biosynthesis Gene Families AT1G78580 68.697 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03159 K16055 - gmx:100797533 981.474