Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03133 ACCAACACCCGCCACTCCTACATCAACGAACAAGAAGACTCTGATGCCGCTCAAGAAAACATTGCCGACTCCCCTCCTTCTTCCTCCCTCTTCAACGTCGATGCCTTAGTCACCACCTCCCCCTCTTCCTCATCAAAGAGAAGGAGGGCAATAGAGAAAAGGGTGGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACCCCACCCTCGGATTCATGGGCATGGAGAAAGTACGGGCAGAAACCCATCAAGGGTTCACCTTACCCCAGAGGGTACTACAGGTGTAGCAGTTCCAAGGGGTGCCCGGCACGGAAACAAGTGGAAAGGAGCTGCGCGGACCCCACAATGTTGGTCGTCACTTACTCCTCCGACCACAACCATCCCTGGCCAGCTTCTAGAAACAACGCCAGGCCCACAAAGAAGCCCGACCCCGAACCGATCACGGACACGGTCGAACCGGATCCCGAACCGGAGGAGAAGTTCGCGGACCTGGGCGGGGATGATTCCATGATCACCACCGCGGACGAGATGGGGTGGCTGGGGGATATGGAAACGGCCACGTCCACCGTTCTCGAAAGCCCAATTATGGCCGCGGGGTACCATGCTGACGTGGATTCGGCGTTGCTGCCGATGAGGGAAGAGGACGAACTGCTCTTCGCCGACCTCGGGGAACTGCCGGAGTGCTCAGTCATGTTCCGGCAGGGGCTACTGGCGGAGAGGCGGCGGTACACGGCGCCGTGGTGCGGGACCACAAGTTGA 780 0.5846 TNTRHSYINEQEDSDAAQENIADSPPSSSLFNVDALVTTSPSSSSKRRRAIEKRVVQIPIKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCADPTMLVVTYSSDHNHPWPASRNNARPTKKPDPEPITDTVEPDPEPEEKFADLGGDDSMITTADEMGWLGDMETATSTVLESPIMAAGYHADVDSALLPMREEDELLFADLGELPECSVMFRQGLLAERRRYTAPWCGTTS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03133 259 MobiDBLite consensus disorder prediction 145 172 - -
Lapu3g03133 259 Gene3D WRKY domain 65 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03133 259 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 237 IPR044810 GO:0003700
Lapu3g03133 259 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03133 259 FunFam WRKY transcription factor 65 53 137 - -
Lapu3g03133 259 MobiDBLite consensus disorder prediction 1 29 - -
Lapu3g03133 259 MobiDBLite consensus disorder prediction 129 175 - -
Lapu3g03133 259 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03133 259 Pfam WRKY DNA -binding domain 78 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03133 259 SUPERFAMILY WRKY DNA-binding domain 74 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03133 Lapu-Chr3 54665135 54666405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03133 13 241 WRKY Transcription Factor Family AT1G29280 55.462 1.83e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g03133 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03133 - - gmx:100127392 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03133 3 54665135 54666405 Lapu3g03133 3 54665135 54666405 ECH