Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03129 ATGAAGAATTGCGATGAATGGAAACCTTTCCTAGTAATGATAGCAATTGATTTTTCTTTAACCATGGTGAACATTCTTCTCAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATATCGTCTGTCAGTTTCTACTGTATTTTTGGCCCCCATCAGCTACTTTAAGGAAAGAAATACAAGACCACGGCTCACATTTCAAATTTTATGCTATCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACACAATACTTCTTCCTTTTAGGGATCCAATACACCTCAGCCACATTTGCCTGTGCCTTTGTCAATATGGTGCCCGCGATAACCTTCATTATGGCATTGCCATTTGGGCTAGAAACAGTGAACATGAAAAGCACAGGTGGCAAAGCGAAGATTCTCGGTACATTTGTGTGCGTAGGAGGGGCATTAGTGTTGACACTTTACAGAGGAAAGCCCTTGTTTGAGGTCTCTCACTATGAAACAGCAGTTCCTCCAGTAGCCATGAGATCTGCAATGGACCAAGCTGCTTCTAGTGCTAGAACAACACAGAAATGGACCATTGGTGTAATAACCTTGATCATGGGAACCCTCTTTTGGTCTTTTTGGTTTATTCTACAGTCAAAAGTAGGAAAGAGCTATCCTTGCCAGTATTCTAGCACAGCAATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTGTCCACTGGCAGCAACTTGTCCTCCTGGGTTCTCAAGGATAAGATTCAAATAATCACTGTCCTTTATTCTGGGATAGTTGGGTCAAGTGTGTGCTATGTGGGGATGTCATGGTGCGTGAAGAAGAGGGGTCCGGTCTTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGTCGGGCATGATTGATATCCCAGTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGATCCGTGTTGGTGATGATCGGGTTGTACATTCTTCTCTGGGGAAAAAGCAAGGACATGATGCAGAACAGTGCCACGAAGTTCCTCCAACAAGTTGAGGAAACCAAGGAACAAGAACCTCAAGTATAA 1077 0.4355 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVSTVFLAPISYFKERNTRPRLTFQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPAITFIMALPFGLETVNMKSTGGKAKILGTFVCVGGALVLTLYRGKPLFEVSHYETAVPPVAMRSAMDQAASSARTTQKWTIGVITLIMGTLFWSFWFILQSKVGKSYPCQYSSTAIMTFFGAMQAAILGLSTGSNLSSWVLKDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPVLHEQLHLGSVVGSVLVMIGLYILLWGKSKDMMQNSATKFLQQVEETKEQEPQV* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03129 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Lapu3g03129 358 Pfam EamA-like transporter family 24 149 IPR000620 GO:0016020
Lapu3g03129 358 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Lapu3g03129 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 333 - -
Lapu3g03129 358 PANTHER WAT1-RELATED PROTEIN 8 339 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03129 Lapu-Chr3 54590757 54593667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03129 6 336 Nodulin-like Gene Family AT1G11460 38.253 1.18e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03129 - - gmx:100791663 635.18