Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03116 ATGGAAAGCATATGGGGCCCATATGGATTATGGCTCAGAATTTACGTTGGATTGATTTCTCTATTGGGAACTCGACTGTGTTTGTCTCTGAACGATGAAGGATTATCCTTGTTGGAATTTCGAGGAAGAATAACTTCTGATCCTTTTCATGCTCTGGCAAATTGGAATCCAAATGATTGTAACCCTTGCAAGTGGTTTGGTGTTCGTTGTGTAGATGGTAAAGTGAAAATGCTGGTCCTACGTGAACTATCTTTGGAAGGCACATTGGCTCCTGAGCTTGGGAAACTTAGGCATCTAAAATCCCTTGTACTCTACAAGAACAGTTTTTCTGGTACTGTTCCCAAAGAACTTGGTGATCTAGACAAGCTGGATTTATTGGATCTAAGGGGGAACAACATGACTGGATGTATCCCAGCAGAAATTGTCCCGATATTGTTGTCAGAACAATTGTTGATTTGTGACAGGAAATGTGAATGCAATGAGTCTCAGGAGATTAGAAAGATCAGATTGCCCTCTAATATCAATCGTTCAACTCCTTTCACAACTTCATCACGTGGCAAGAACAGAAAGGTTGCACACCGTATACAACAACAACATGATGTGAAAAGTTTGTGGCACAGAAATTTCAAGCAATGGAATGAGGCAGATTCATCTTTTATTCCACTTAAAGGAGCGCTAAAAAAATACGTCAATGCTGCCATTGCTGTGGCACTGCCGCTGTTAAAGCAAGGAAAGGCCACCCCTCATGCCCATACAGAGAAATGGTGTGACACTCTGACTAGGTCTGATGAGTCAGAGATTGGCCAGAATGTAGCAAATCTAGTCAGTTCAGCACGACGTAAGCTGCTTGATCAGTCCAGTAACCTTGCAGCTGCACCTTTCAGTGGTGGACCTACCATACAGATCAGTTCTATTCCAATTACCCAGAGCAGTGGAGGTTTTCCAGCTTTCCCAGACAGCAATAAGAAACAAAATCAATCACCTGCACAATTGCCTTCACCTTCTAATTTTCCATCTACGAATCAACCAAGTCAACAAAATTCAGCTGATGCTGCTTCTGGAAAATTATGGGAGTATGTTGTTATAATAGCAGGTGTAGCTGTCTTGTTCATTATTGTTTTGACCATTCTTTGCATTTGGCGAAAACGAGCAGCAAAAGTAATAAAGCCATGGAAGACAGGAATAAGTGGACAGCTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATCAGGCAGAGCTGGAGACAGCCTGTGAAGATTTCAGCAATATTATTAATAGTTTTGATGAATGCACTATATATAAGGGAACACTATCCAGTGGTGTCGAGATTGCTGTTGATTCGACTATTGTTACTTCAGGCCGTGAGTGGTCAAAGAACATGGAGACAGCCTATCGTAAAAAGATTGCTACATTATCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGGTACTGTGATGAAGAAGAACCATTCACCAGGATGATGGTATTTGAGTATGCTCCGAATGGAAGCTTATTTGAGCATCTGCATGTTAAGGAAGTCGAACCTCTTGACTGGAGCGCAAGAATGAGAGTTATTATGGGCACGTCATATTGTCTTCAGTATATGCACCATGATCTGAATCCACCAGTAGCTCATTCCAACCTCAATTCAGTTGCTATATTATTGACAGATGACTTTGCTGCTAAGATATCAGAAATCGCTTTTGGCAAGAATGTATCGTCACAAGCCAACACACCTGGACATGAGTCACAGAAATCTGAGTTGCCACCCCAGGCTGATCCTGAAACCGATGTCTATAACTTTGGAGTGTTGTTGCTTGAAATCATTTCCGGAAAACTACCATACTCTGAAGAACACGGTCACCTTGCTAACTGGGCTGTTGAGCACTTGAATGATAAGCAAAGCATCGGCAATCTGATCGATCCCTCGCTGGATTCCTTCAAAGACGAAGAACTTGATGTCATCTGTGAGGTGATAAAAGGATGTCTTCAATCTGATGCACGGCTAAGACCAACAATGAAGGACATAACTCCCAGATTGAGGGAAGTGCTTCATGTATCACCTGAGCAAGCTGTCCCAAGACTCTCTCCTCTCTGGTGGGCTGAACTGGAGATTTTATCATCGGAGGCCACTTAA 2148 0.4236 MESIWGPYGLWLRIYVGLISLLGTRLCLSLNDEGLSLLEFRGRITSDPFHALANWNPNDCNPCKWFGVRCVDGKVKMLVLRELSLEGTLAPELGKLRHLKSLVLYKNSFSGTVPKELGDLDKLDLLDLRGNNMTGCIPAEIVPILLSEQLLICDRKCECNESQEIRKIRLPSNINRSTPFTTSSRGKNRKVAHRIQQQHDVKSLWHRNFKQWNEADSSFIPLKGALKKYVNAAIAVALPLLKQGKATPHAHTEKWCDTLTRSDESEIGQNVANLVSSARRKLLDQSSNLAAAPFSGGPTIQISSIPITQSSGGFPAFPDSNKKQNQSPAQLPSPSNFPSTNQPSQQNSADAASGKLWEYVVIIAGVAVLFIIVLTILCIWRKRAAKVIKPWKTGISGQLQKAFITGVPKLNQAELETACEDFSNIINSFDECTIYKGTLSSGVEIAVDSTIVTSGREWSKNMETAYRKKIATLSRVNHKNFTNLIGYCDEEEPFTRMMVFEYAPNGSLFEHLHVKEVEPLDWSARMRVIMGTSYCLQYMHHDLNPPVAHSNLNSVAILLTDDFAAKISEIAFGKNVSSQANTPGHESQKSELPPQADPETDVYNFGVLLLEIISGKLPYSEEHGHLANWAVEHLNDKQSIGNLIDPSLDSFKDEELDVICEVIKGCLQSDARLRPTMKDITPRLREVLHVSPEQAVPRLSPLWWAELEILSSEAT* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03116 715 FunFam Inactive receptor-like serine/threonine-protein kinase 394 502 - -
Lapu3g03116 715 SUPERFAMILY Protein kinase-like (PK-like) 409 683 IPR011009 -
Lapu3g03116 715 PANTHER PROTEIN MALE DISCOVERER 2 25 713 - -
Lapu3g03116 715 ProSiteProfiles Protein kinase domain profile. 385 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03116 715 FunFam Leucine-rich repeat receptor-like kinase 35 153 - -
Lapu3g03116 715 Gene3D Phosphorylase Kinase; domain 1 391 502 - -
Lapu3g03116 715 SUPERFAMILY L domain-like 31 142 - -
Lapu3g03116 715 MobiDBLite consensus disorder prediction 577 597 - -
Lapu3g03116 715 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lapu3g03116 715 Gene3D Transferase(Phosphotransferase) domain 1 503 696 - -
Lapu3g03116 715 MobiDBLite consensus disorder prediction 314 348 - -
Lapu3g03116 715 Pfam Protein tyrosine and serine/threonine kinase 434 683 IPR001245 GO:0004672|GO:0006468
Lapu3g03116 715 Gene3D Ribonuclease Inhibitor 35 149 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03116 Lapu-Chr3 54447977 54454735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03116 67 687 Receptor kinase-like Gene Family AT5G56040 25.299 1.61e-44 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lapu3g03116 PK_Tyr_Ser-Thr 7.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03116 - - gmx:100808098 1172.15