Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03100 ATGTATTGTGCTGCTGTTAATCTGCAGGAAATGGCAACTCTAGTTGAACCACCAAACAGAATTAAGCCAAAGGGAAAGCATTATTATACAATATGGCAAACATTGTTTGAGATTGATACGAAGTATGTTCCAATCAAGCCTATTGGCCGAGGAGCATATGGAGTGGTGTGCTCTTCCATCAATAGGGAGACCAATGAGAGAGTTGCGATTAAGAAGATTGGTAATATATTTGAGAATTCTATTGATGCTTTGAGAACTTTAAGGGAGCTGAAGCTGCTAAGACATATTCGGCACGAGAATGTCATTGCTTTGAAAGATGTTATGATGCCAATCCAGAGGACAAGTTTTAAGGATGTCTACTTGGTCTATGAACTCATGGATACCGATCTTCACCAAATTATCAAGTCGTCGCAACCACTTTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTCCTTCGAGGTCTTAAATACCTTCATTCAGCAAATATTCTTCACCGGGATTTGAAGCCTGGGAATCTGCTCATCAATGCCAATTGTGATTTGAAGATCTGTGACTTTGGCCTAGCAAGAACTAATGGAGTTGATGGTCAGTTTATGACAGAATATGTTGTCACTCGTTGGTATCGTGCACCAGAGCTCTTGCTATGCTGTGACAACTACGGGACCTCTATTGATGTGTGGTCAGTAGGGTGTATCTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCTGGCACTGAGTGTCTCAACCAGCTGAAACTAATCATAAGTGTTCTTGGAAGCCAGCATGAGTCTCATATTGAGTTTATTGATAATGCAAAAGCCAGGAGGTTTATCAAATCACTGCCCTATACTAGGGGGAGACACTTCTCTCAGCTATATCCACAAGCAGATCCATTAGCCATAGATTTGTTGCAAAAGATGCTTGTATTTGATCCAACCAAGAGAATTACTGTCTTAGAAGCTCTCCAACACCCCTATATGTCTGGCCTATATGATCCAAGGTGCAACCCTCCTGCTCAGGTTCCCATCAGTCTTGACATAGATGAACATTGGGGAGAACAGATGATTAGGGAAATGATGTGGAATGAGATGCTACATTATCACCCTGAAGCTGCTTCTGCCAATGCATAG 1137 0.4151 MYCAAVNLQEMATLVEPPNRIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNERVAIKKIGNIFENSIDALRTLRELKLLRHIRHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQHESHIEFIDNAKARRFIKSLPYTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMSGLYDPRCNPPAQVPISLDIDEHWGEQMIREMMWNEMLHYHPEAASANA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03100 378 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
Lapu3g03100 378 FunFam Mitogen-activated protein kinase 28 136 - -
Lapu3g03100 378 FunFam Mitogen-activated protein kinase 126 355 - -
Lapu3g03100 378 CDD STKc_TEY_MAPK 36 371 - -
Lapu3g03100 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lapu3g03100 378 SUPERFAMILY Protein kinase-like (PK-like) 34 335 IPR011009 -
Lapu3g03100 378 SMART serkin_6 42 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03100 378 ProSiteProfiles Protein kinase domain profile. 42 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03100 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 41 336 - -
Lapu3g03100 378 Gene3D Transferase(Phosphotransferase) domain 1 126 355 - -
Lapu3g03100 378 Gene3D Phosphorylase Kinase; domain 1 29 365 - -
Lapu3g03100 378 ProSitePatterns MAP kinase signature. 77 180 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lapu3g03100 378 Pfam Protein kinase domain 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03100 Lapu-Chr3 54267982 54271341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03100 11 378 MAP Kinase Gene Family AT2G18170 85.598 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lapu3g03100 Pkinase 1.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03100 K20537 - gmx:100783422 744.962