Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03089 ATGGCGGTGCCTCTACTCTCGAAGAAGGTCATCAAGAAGAGAGTGAAGAGGTTCAAGAGGCCTCAGAGTGACCGCAAGATTTCCGTCAAGCCTAGCTGGCGGAGACCAAAGGGTATCGATTCCCGTGTTAGGAGAAAGTTTAAAGGATGTGTTTTGATGCCGAACATTGGTTATGGGTCTGACAAGAGGACACGTCACTATCTTCCGAACGGTTTCAAGAAATTTGTTGTTAGCAATGTGAAAGACTTGGAACTGCTCATGATGCACAACAGGATTTACTGTGCCGAGATTGCACATAATGTTTCGACAAGGAAGAGGAAGGAAATAGTTGAGAGAGCGGCGCAGCTTGATGTTGTTGTGACAAACGAAACTGCCAGATTACGCAGCCAGGAGGATGAATAG 402 0.4652 MAVPLLSKKVIKKRVKRFKRPQSDRKISVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKRTRHYLPNGFKKFVVSNVKDLELLMMHNRIYCAEIAHNVSTRKRKEIVERAAQLDVVVTNETARLRSQEDE* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03089 133 CDD Ribosomal_L32_L32e 18 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lapu3g03089 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lapu3g03089 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lapu3g03089 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Lapu3g03089 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03089 Lapu-Chr3 54145753 54149137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03089 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 82.707 2.65e-81 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03089 K02912 - gmx:100499846 241.891