Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g03068 | ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGAACTTGTTGCGCCCACTATTACTCCTACAACTAACAACACTCTTATTACCGACACAAAACCAACCGAAAATCGCACCATAACTTGCCCCTCATGTGGCCATAACATTGAATTCCAAGATCAGACTGGAATCAATGACTTGCCGGGGTTACCAGCTGGGGTGAAATTTGATCCGAATGACCAAGAGATATTAGAGCATTTGCAAGCAAAGGTGCTTTCTGATGTGCCCAAGCTCCATCCCCTAATTGATGAGTTCATACCAACGCTTGAAGGGGAGAATGGGATCTGTTATACGCATCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAGATCCGCCACTTCTTTCATAGGCCATCTAAAGCATACACAACAGGAACAAGGAAGAGAAGAAAGGTTCACACTGATGAAGAGGGAAGCGAGACAAGGTGGCATAAAACAGGCAAAACCAGACCAGTTTTTGTTGGTGGTGCTGTGAAGGGTTTCAAAAAAATACTAGTCCTCTACACCAACTATGGGAGGCAAAAGAAGCCCGAGAAGACCAATTGGGTGATGCATCAATACCATCTTGGCAGCAACGAAGAAGAGAAAGATGGAGAATTCGTGGTTTCAAAGGTGTTCTACCAAACACAACCTCGACAATGTGGTAATTCCATTACAAAGCAGGATCTGTATGATGAAGAAAGATTGACTAACCAGAATGTTAATGATGATAATATAATACCTAGAAGTGCAACTCTTATGGACTACTACAACCCTTCTTTCATAAATTATGACCATGTGGGTGGTCGCAATAATAGGGAAAGTTCACCTCAACTTATTCCAAATTTGGTCATGCAAGGTGATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAACCAAAGCCAGGCTGGACACAAAATAG | 945 | 0.4275 | MTWCNDSDEERGIELVAPTITPTTNNTLITDTKPTENRTITCPSCGHNIEFQDQTGINDLPGLPAGVKFDPNDQEILEHLQAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGEFVVSKVFYQTQPRQCGNSITKQDLYDEERLTNQNVNDDNIIPRSATLMDYYNPSFINYDHVGGRNNRESSPQLIPNLVMQGDSSSFIRLAMDATKARLDTK* | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g03068 | 314 | Gene3D | NAC domain | 72 | 226 | IPR036093 | GO:0003677|GO:0006355 | |
Lapu3g03068 | 314 | Pfam | No apical meristem (NAM) protein | 64 | 203 | IPR003441 | GO:0003677|GO:0006355 | |
Lapu3g03068 | 314 | MobiDBLite | consensus disorder prediction | 142 | 157 | - | - | |
Lapu3g03068 | 314 | SUPERFAMILY | NAC domain | 58 | 222 | IPR036093 | GO:0003677|GO:0006355 | |
Lapu3g03068 | 314 | ProSiteProfiles | NAC domain profile. | 63 | 222 | IPR003441 | GO:0003677|GO:0006355 | |
Lapu3g03068 | 314 | MobiDBLite | consensus disorder prediction | 136 | 157 | - | - | |
Lapu3g03068 | 314 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 73 | 22 | 250 | IPR044799 | GO:0003700 | |
Lapu3g03068 | 314 | FunFam | NAC domain-containing protein 73 | 72 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g03068 | Lapu-Chr3 | 53916837 | 53920586 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu3g03068 | 1 | 233 | NAC Transcription Factor Family | AT4G28500 | 70.940 | 1.40e-124 | 357 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Lapu3g03068 | NAM | 1.9e-21 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g03068 | - | - | vra:106766970 | 605.134 |