Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03061 ATGGATTCTGACTTCTGGACCTCACGTCTTGCCGCCGCCAAACGCCAATACACGCTTCAGCATCACCATCAAAATTCTCATTTAGATCGGTTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCCGATTTCCCTTGCCCCTACTGTTATGAAGACTTTGACATCGCGTCTTTGTGTTCTCATCTTGAAGACGAACATTCTTGTGAATCAAGAGTCACGATTTGTCCTGTATGCTCTGTTAAAGTTGCAAGGGACATGTTAAGTCACATAACGCTGCAACATGGGCACTTGTTTAAGGATTACGTACAGAGAAGACGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACATTGTCTCTCTTGAGTCGAGATCTTCGTGAGGCTCATCTACAGGTGCTTCTTGGTGGTGGTGGTGGTGGAGGATACCGGTCAAACAGTGCTGCAGCGTCTAATGTTGCTACTGATCCTTTTTTATCCTCATTTATTTTGAATTTCCCGGCTTGTGAAGCCGAAGAAATTTCAAAATCTGTGGTAACAAGTGCGGAGGATTCTTCTGCCAAAAATGTGACACCTGAACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTACCGAAGAGCGAGAGAAAAGGATGAGACAAGCTGCTGGTAGATCTGGTTTTGTGCAGGACTTGTTTCTTTCAACTTTGTTAGGCGACTAA 711 0.4416 MDSDFWTSRLAAAKRQYTLQHHHQNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPVCSVKVARDMLSHITLQHGHLFKDYVQRRRRLRRVAIPNSQTLSLLSRDLREAHLQVLLGGGGGGGYRSNSAAASNVATDPFLSSFILNFPACEAEEISKSVVTSAEDSSAKNVTPEHIWKSSFDPSLSTEEREKRMRQAAGRSGFVQDLFLSTLLGD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03061 236 Pfam Stress-induced protein Di19, C-terminal 121 233 IPR027935 -
Lapu3g03061 236 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Lapu3g03061 236 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 234 IPR033347 -
Lapu3g03061 236 SUPERFAMILY TRAF domain-like 46 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03061 Lapu-Chr3 53814921 53818702 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu3g03061 Di19_C 4.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03061 - - gmx:100792230 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03061 3 53814921 53818702 Lapu3g03061 3 53814921 53818702 ECH