Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03049 ATGGAGGAGATTTCAAGTTCATGGTACAAGGAATATGTCGCCGGCTTGCTCGCTGGTGTTGCCGCTGTAGCCACTGGCCACCCATTTGACACTGTCAAGGTGATGCTGCAAAAGCACAATGCAGAAGCACATATGATTCAGTACAGAAATGGATTGCATTGCACTGCTAGGATATTGAAGACAGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTGTTGGGATGGCAGTCGAAGGATCACTATTTTTTGGCATTTATTCCCAGACAAAAGTGTACCTTCAGGGGGGAGTTCAAAGTGGGGAACCACGGCCGGAAGTTATAATACCATCTGCAGCTTACAGTGGTGCCATCAACAGTTTTGTGTTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATACAAGGCACTGACTCTTTGGTTCCGAAGTCCAGTAGATACAGTAGTCCCCTTGATTGTGCTCTTAAAACAATAGAAACTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTGCACAACATTGCTAAGAGAATCTATAGGGAATGCTGTCTTTTTCAGTGTTTACGAATATGTGCGTTATCAGATGCATTCAAATATCAAAGTGTCCTCGTCCAATTACAGCAACCTCGTTGACATTGGAATTGGGGTTGCTACTGGTGGTCTTGGTGGTGTTGCTTTTTGGTTGACGGTTTTGCCTCTTGACGTGGCAAAGACTTTAATTCAGACAAACCCTGACAAAAACTGTCCAAGAAATCCTTTTCGGGTCTTGAGTTCAATATACCAAAGGGCTGGATTGAAGGGGTGCTATGCAGGTTTGGGTCCTACTATAAGTCGAGCATTTCCTGCTAATGCTGCAACAATTGTCGCGTGGGAGTTAGCACTGAAAATGCTAGGCATTAAGCGTGACTAA 918 0.4412 MEEISSSWYKEYVAGLLAGVAAVATGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTARILKTEGIKGLYRGATSSFVGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPEVIIPSAAYSGAINSFVLGPTELIKCRMQIQGTDSLVPKSSRYSSPLDCALKTIETEGVKGIFRGGCTTLLRESIGNAVFFSVYEYVRYQMHSNIKVSSSNYSNLVDIGIGVATGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFRVLSSIYQRAGLKGCYAGLGPTISRAFPANAATIVAWELALKMLGIKRD* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03049 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Lapu3g03049 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 300 - -
Lapu3g03049 305 Pfam Mitochondrial carrier protein 7 97 IPR018108 -
Lapu3g03049 305 Pfam Mitochondrial carrier protein 113 195 IPR018108 -
Lapu3g03049 305 Pfam Mitochondrial carrier protein 219 300 IPR018108 -
Lapu3g03049 305 Gene3D Mitochondrial carrier domain 113 305 IPR023395 -
Lapu3g03049 305 Gene3D Mitochondrial carrier domain 2 112 IPR023395 -
Lapu3g03049 305 SUPERFAMILY Mitochondrial carrier 7 294 IPR023395 -
Lapu3g03049 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Lapu3g03049 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Lapu3g03049 305 FunFam Mitochondrial arginine transporter BAC1 isoform A 11 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03049 Lapu-Chr3 53700027 53706557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03049 2 300 Antiporters AT1G79900 30.065 3.00e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03049 K15109 - gmx:100815087 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03049 3 53700027 53706557 Lapu3g03049 3 53700027 53706557 ECH