Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03008 ATGCTTTTCTTCACTGTCTTCCTTCTCTGCCTTTCTCTTGTTTTCATCATCATCAAACTGTATTCCAATGAAGCAACTACCAAAAACTCACCCCCTTCTCCTCCAAGGTTACCTCTGCTGGGAAATCTTCACCAACTTGGTTTGTTCCCACACCGCACACTCCAAACTTTGGCTCAAAACTACGGCTCTCTGATGGTGCTCCATTTCGGGAAGGTACCAGTGCTTGTGGTCTCATCTGCTGATGCAGCACGTGAGGTGATGAAAACTCATGACGTGGTCTTCTCAGACAGGCCACAACGTAAGATGAACGATGTTCTCTTGTACGGTTCAAAGACCTGGCAAGTTCTACGTACGGAGAATACTGGAGACAAATAA 375 0.4613 MLFFTVFLLCLSLVFIIIKLYSNEATTKNSPPSPPRLPLLGNLHQLGLFPHRTLQTLAQNYGSLMVLHFGKVPVLVVSSADAAREVMKTHDVVFSDRPQRKMNDVLLYGSKTWQVLRTENTGDK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03008 124 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 111 - -
Lapu3g03008 124 SUPERFAMILY Cytochrome P450 27 109 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03008 124 Gene3D Cytochrome P450 16 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03008 124 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03008 124 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03008 124 Pfam Cytochrome P450 31 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03008 Lapu-Chr3 53266273 53278678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03008 1 111 Cytochrome P450 AT3G48320 51.327 1.62e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03008 - - var:108336564 187.963