Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02999 ATGGCTTACCGGCGTTGCCTTTTGATAAGAAGGAACCTTGTAGATCGGAGGTGCCATCCGTCTTTCAGTTATGTTCTCCATAGCGATGAAGGGAGACGGGAAAAGTCTGAGGAAAAATCATCTTCAGCAGGCGTTAGTAGTTTTGCCCAATTAAGGTCTTTTGGAAGTTCTCTTAATGGACCATTGGGGTTTTCTGCTCCTTCCCGAGATAGATTTCTTTCTCCATGCACTGGATATGGTTTCTGCCGGTATATGTCCACAGTGAATCAGGGTTCGGATAATATTGACAGTGACATAATCACTGATGTAGCTGATGTACTCACTGACACTACCGTTGACACTATAGCTTCTCAGGCTGCCACCGTTAATGAAGTTGCAATTGCTGCCGCTGATTCTTTTTTGCCTGTACAGGGCTTGCAGTACTTGATAGATGCTGTGCATTCCTACACTGGCTTAAATTGGTGGGCAGCAATAGTTCTTACAACCCTGTTGATTCGAAGTGCTACAGTCCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAACTTACGTTAATGAGGCCTCGCTTGGAGGAGATAAAGCAACAGATGGATGGGATGGCTATGGATCCCGTAGCTGTTGCTAAAGGTCAGCAGCAGATGAAGAAGCTATTTAAGGAATATGGTGTGACCCCTTTTACGCCATTGAAAGGACTCTTTATTCAAGGACCTATTTTTGTTAGTTTTTTTCTTGCGATAACAAACATGGCTGAAAAAATGCCCTCATTCAAGCATGGCGGAGCTTATTGGTTTACTGATCTATCAACTCCAGATGCCTTATACGTTTTTCCAGTTTTGACTGCATTGTCATTCTTAATAACTGTAGAGTGTAATATGCAAGAAGGTATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATGTCTCTAGGGGTCTTGCGGTTCTTACAGTTCCTTTCACCATGGGATTTCAGAAGGCAATATTCTGTTACTGGATTACATCAAATTTGTTTTCTCTTGTATATGGACTTGCGCTTAAAGTTCCTGGTGTAAAGAAAACGTTGGGTATTCCTGAAATACCTGTTACAGTCCCCACCAGTGCTCCTCAATCGCCCTTTCCTATATTTCACGCTCTAAAACAAGCTACCTCTGCAACAAATGTGTCAAGCTCAATAGTACCAGATGAACCTTCAAAACATTCAAATACAAAGATATCTTCTTCTTCTGTTATTAGTCAAAGACTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACAAGTGA 1287 0.4149 MAYRRCLLIRRNLVDRRCHPSFSYVLHSDEGRREKSEEKSSSAGVSSFAQLRSFGSSLNGPLGFSAPSRDRFLSPCTGYGFCRYMSTVNQGSDNIDSDIITDVADVLTDTTVDTIASQAATVNEVAIAAADSFLPVQGLQYLIDAVHSYTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPRLEEIKQQMDGMAMDPVAVAKGQQQMKKLFKEYGVTPFTPLKGLFIQGPIFVSFFLAITNMAEKMPSFKHGGAYWFTDLSTPDALYVFPVLTALSFLITVECNMQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFQKAIFCYWITSNLFSLVYGLALKVPGVKKTLGIPEIPVTVPTSAPQSPFPIFHALKQATSATNVSSSIVPDEPSKHSNTKISSSSVISQRLRSLEKQVKGRKKNK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02999 428 NCBIfam membrane protein insertase YidC 153 340 IPR028055 -
Lapu3g02999 428 CDD 5TM_Oxa1-like 151 348 - -
Lapu3g02999 428 MobiDBLite consensus disorder prediction 388 428 - -
Lapu3g02999 428 MobiDBLite consensus disorder prediction 388 415 - -
Lapu3g02999 428 Pfam 60Kd inner membrane protein 154 340 IPR028055 -
Lapu3g02999 428 PANTHER OXA1 106 422 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02999 Lapu-Chr3 53175519 53188551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02999 157 352 Chloroplast and Mitochondria Gene Families AT2G28800 23.881 9.75e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02999 K03217 - gmx:100817052 685.256