Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02995 ATGCATGAGAGATACAAAATTGACCGTTTCAATATCAATATCATGGACAGCACGGATTCATCATCAGGGTCTCACCATCCACACCTTCCTCCAGGCTTTCGGTTCCACCCCACCGACGAAGAACTCGTCGTTCACTACCTCAAGAGAAAAGCTTCTTCTGCACCTCTTCCCGTCGCCATCATCGCCGACGTTGATCTCTACAAGTTCGATCCTTGGGAGCTCCCAAGTAAAGCAACTTTTGGTGAACAAGAGTGGTACTTTTTCAGCCCAAGGGATCGGAAATACCCAAATGGGGTTAGACCCAACAGAGCTGCTACTTCTGGGTATTGGAAGGCCACTGGAACTGACAAGCCTATACTAACATCTGATGGGCACCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTCTACGGTGGAAAGCCTCCAAAAGGGGTGAAAACCAATTGGATCATGCATGAGTATAGGCTTGTTCATGATTCCTTTAATTCAACCTCAAAACCCCCTCCTCTTGTTCCTCCAAACAAGAAAAATTCCCTCAGGCTGGATGATTGGGTTTTGTGTCGAATATACAAGAAAAGCAACAGCACCACCCTAACAAGGCCACCCTTGATGGAGCATGGAGAGGAGCTTTCAATGGAGAACATGCTTCCAACGATGTCAACTTTGTCAACTTTGTCAATGGCTCATAATAATACTCAAAATTCGAAACCTCCATCTTCGAGGGGTACCAGTTATGGACCACTAGGACTTGAAAATGATGATAACTTCTTCGATGGAATCTTAGCCGTTGATCATCAGAACATGCAAAGTGGTTCTGATTCTCACCTTTTCTCTCCAAACTCAAAGGGTAGCAACTTCCCTATGAAACGTGCACTCACATCACAACAACTTTGGAACGAGACAGGGTCTCCGGGGTCATCTTCTTCATGTAAGCGATTCCATGGTGATCTTAATAGTGGAAGCAGCAACGCTGAGGACAACGATTCCTTTGTTTCCTTGCTTAGTCAGTTTCCCCAGAACGCAACTTTTCAACCAAACGCGATTCATGGCTCCGTTGGGGATGGTGCACAGAGACAACAAGAGTTTCAACTTCCTGGTATAAATTGGAAC 1110 0.4532 MHERYKIDRFNINIMDSTDSSSGSHHPHLPPGFRFHPTDEELVVHYLKRKASSAPLPVAIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPILTSDGHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVHDSFNSTSKPPPLVPPNKKNSLRLDDWVLCRIYKKSNSTTLTRPPLMEHGEELSMENMLPTMSTLSTLSMAHNNTQNSKPPSSRGTSYGPLGLENDDNFFDGILAVDHQNMQSGSDSHLFSPNSKGSNFPMKRALTSQQLWNETGSPGSSSSCKRFHGDLNSGSSNAEDNDSFVSLLSQFPQNATFQPNAIHGSVGDGAQRQQEFQLPGINWN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02995 370 MobiDBLite consensus disorder prediction 298 325 - -
Lapu3g02995 370 PANTHER NAC TRANSCRIPTION FACTOR 56 29 213 - -
Lapu3g02995 370 Pfam No apical meristem (NAM) protein 30 156 IPR003441 GO:0003677|GO:0006355
Lapu3g02995 370 FunFam NAC transcription factor 56 38 197 - -
Lapu3g02995 370 Gene3D NAC domain 38 197 IPR036093 GO:0003677|GO:0006355
Lapu3g02995 370 MobiDBLite consensus disorder prediction 228 248 - -
Lapu3g02995 370 SUPERFAMILY NAC domain 24 192 IPR036093 GO:0003677|GO:0006355
Lapu3g02995 370 MobiDBLite consensus disorder prediction 228 246 - -
Lapu3g02995 370 ProSiteProfiles NAC domain profile. 29 192 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02995 Lapu-Chr3 53132703 53134383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02995 19 370 NAC Transcription Factor Family AT1G61110 54.270 2.77e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu3g02995 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02995 - - gmx:100797132 618.231