Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02974 ATGCACGGAAGGTATGGCGAGAGATCGAGCGCCGCGCCTCGAGAGAAGCGAAGTTTGGATTCGGCTTCGGCCGAAGAAGGTCAACCTGATCGGAAACGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTTGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTCCGCAGAGTTGTTAGTGAAGAAGTCGAGCGTGCTTTGGCAAAACTATGCCCTGCCAAGCTTGCTGTAAGGTCTTCCCCAAAGCGAATAGAAGGCCCTGATGGCACAAATTTACAGTTGCAGTTCAAGACCAGGTTGTCCCTTCCCCTCTTTACAGGTGGAAAGGTGGAGGGCGAGCAAGGTTCAGCCATTCATATTGTTTTGATTGATGCGATCACTGGCAATATTGTCACATCAGGGCCAGAGTCATGTGTCAGACTAGATGTTATTGTACTGGAGGGAGATTTCAATAATGAGGATGATGAGAATTGGAGTGAAGAAGAATTTGACAGTCATGTTGTTAAAGAGCGGGAAGGAAAAAGGCCTCTTCTAACTGGTGATCTGCAAGTCACGCTGAAGGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGGCTGAAAGTTGCCTTGGGTTGCTGTGAAGGAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACAGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCTCCTGCGTTGAATGACGAGGTCTGGAGACTCGAGAAAATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCTGGAGTATATACTGTTGAAGACTTCTTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAACATCCTTGGAAGTGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCCAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATACTATCCTGAAGATGCAAGAAATGTGGGTGTTGTTTTCAATAATATTTATGAATTAAGTGGTTTAATTGCCAACGACCAATTTTACTCAGCTGATTCTCTCTCCGAGAATCAAAAGGTTTGTGTAGACACGTTGGTGAAGAAAGCATATGATAATTGGATGCATGTTATTCAGTATGATGGGAAGTCTTTGATAAATGACAATGAGGATAAGACTTTGGACACCTCTCATCCTCAGGCACCAATGACTTCCCATGAATATTCAAACTCCCTTCAGCAGATACCCATCCCAGCTTTGCCACTTCCAGTACATGCAGGCCAGCCTTCAATCGATTCAGGAGTAACAGTTGGAGGTTATCATGATGGGACAACTTCTAGATTCTCCTTACAACCACAGAATCCTAGTCTTAACTCTTCCATTCAGTTTGATGATAACGCATTTTCTCTACAAAACCAGTTGATGAGTGTTCCACACCATGCCCAACTTCCAGGGAATGAGAATGGACTAACTCTTGGTCCTGCACAATCATCCACACATGGCTTTGAGCCTGTCAGCATTTCAAATTCTAATTATAGAGGAGTTGAAGAATACTTCCCAGAGGAGGAAATTCGTATTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTATGTTCAACATGGGAGGCCAACCGCATCCTACCTTTAATGGCCACGATGATGGGTACCCTAGTTCATCTACATACATTTCTGCAAACCCCATGGGCTACAATTTTGATGATGAACCAAATCGTTCCTCAGGCAAAGCTGTTGTAGGCTGGCTCAAGCTGAAGGCAGCTTTAAGATGGGGTATTTTTATTCGGAAGCAGGCTGCTGAGAGACGGGCACAACTGGTTGAATTGGAGGACCCATAG 1896 0.4446 MHGRYGERSSAAPREKRSLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLCPAKLAVRSSPKRIEGPDGTNLQLQFKTRLSLPLFTGGKVEGEQGSAIHIVLIDAITGNIVTSGPESCVRLDVIVLEGDFNNEDDENWSEEEFDSHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVALGCCEGMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYELSGLIANDQFYSADSLSENQKVCVDTLVKKAYDNWMHVIQYDGKSLINDNEDKTLDTSHPQAPMTSHEYSNSLQQIPIPALPLPVHAGQPSIDSGVTVGGYHDGTTSRFSLQPQNPSLNSSIQFDDNAFSLQNQLMSVPHHAQLPGNENGLTLGPAQSSTHGFEPVSISNSNYRGVEEYFPEEEIRIRSHEMLENEDMQHLLRMFNMGGQPHPTFNGHDDGYPSSSTYISANPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELEDP* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02974 631 PANTHER OS02G0177800 PROTEIN 15 546 IPR012416 GO:0005516
Lapu3g02974 631 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Lapu3g02974 631 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Lapu3g02974 631 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Lapu3g02974 631 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02974 Lapu-Chr3 52873582 52879649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02974 14 626 Calmodulin-binding Proteins AT5G57580 61.164 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02974 - - gmx:100812605 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02974 3 52873582 52879649 Lapu6g01197 6 11828269 11834244 PCT