Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02954 ATGACGTCACACTCTCACTACCAACCCGACTTAGACGCCGACTCTGTCACCTCCTCACCTCGCTCCGACCATTTCCACGACGCGCCGCCGCGTGTCCGCTTTATGTGCAGCTTTGGCGGCAAGATTCTCCCCCGCCCCCACGACAACCAGCTCCGCTATGTCGGCGGAGACACTCGAATCGTCGCCGTCCACCGCTCCATCTCCTTCTCCGCTCTCATTCTCAAACTCTCCAAACTCTCAGGAATGACCAACATAACCGCGAAGTACCAGCTCCCGAACGAGGATCTGGACGCGTTGATCTCGGTCACGACGGACGAAGACGTGGAGAACATGATGGATGAGTACGACCGCGTCGCACAGAATCAGAACCCGCGATCGGCGCGGCTTCGGCTATTCCTTTTTCCCGAAGGGGAAGACTCCCGAGCCAGTAGCATCAGCTCGCTCTTGAACGGCTCAGCCAAACGCGAGAACTGGTTCCTCGACGCGCTAAACGGCGGCGTTTCGGGTCTCGAGCGTGGCCGCTCTGAAGCCTCTTCCATGGTCTCTGAAGTACCCGATTACCTCTTCGGATTAGACAACTCCGAAGAAACACAGCAACGCGACCCACGACCAAAAGACCGACCCGTTCTTCAAGACAACGTTTCCGTTTCGGATCCGGGTTCTCCCGCCCCGGTTGTTTCATCGCCGTATTGTTCCACGTCATCAGCGCCCTGCGTGCCTTCTCTTCCGAACCTTCCCCCAGTGAAAACTAAACTTTCAAACCCTGTTTCTGATTTGGACTCCAAGGAAAATCAAATCGAACCTGAAACGGAAGCTCAACCCAACCACAACCCGAACCTATACCCGGGTAACCCTGTAGTTCACTACCCCCAAGAACCTGCTTATTCTGCTCATTCAGTAAACCCGGTTCCAGTTTTCTATGTACCCGGTCCGGTTCGACCGGGAACTGTGCAGGTTCCTATGCAGCAGACACCTTACCCCTACGTTCAACAACCATACCATGCAGTGATGCCATCTCAGGTTCCAATCGGCTACCATCATTTGATTCCGGGTTCGGGTCAAGTATACGGTGCAGGCGTGAGGCACGTGTCTCCACTGCAGCCTTACAATCCTTCCGCCGCAGTGGTTCACGACGGTTTGAAGCAGCACGTGTATCATGCCATGCCAAACTCCGGTCAGGTTCACCCGATGATGCCGATGACTGGTGCGGATGAACCGCAGAGAGGTGGAGCGGAGTATGTGATGGGTCGGGGCCCCAATTCGCTGAATAACTGA 1275 0.5561 MTSHSHYQPDLDADSVTSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSISFSALILKLSKLSGMTNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNQNPRSARLRLFLFPEGEDSRASSISSLLNGSAKRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEETQQRDPRPKDRPVLQDNVSVSDPGSPAPVVSSPYCSTSSAPCVPSLPNLPPVKTKLSNPVSDLDSKENQIEPETEAQPNHNPNLYPGNPVVHYPQEPAYSAHSVNPVPVFYVPGPVRPGTVQVPMQQTPYPYVQQPYHAVMPSQVPIGYHHLIPGSGQVYGAGVRHVSPLQPYNPSAAVVHDGLKQHVYHAMPNSGQVHPMMPMTGADEPQRGGAEYVMGRGPNSLNN* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02954 424 PANTHER OS05G0427100 PROTEIN-RELATED 13 357 - -
Lapu3g02954 424 MobiDBLite consensus disorder prediction 194 279 - -
Lapu3g02954 424 CDD PB1_UP2 35 134 - -
Lapu3g02954 424 SMART PB1_new 46 136 IPR000270 GO:0005515
Lapu3g02954 424 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Lapu3g02954 424 Gene3D - 52 135 - -
Lapu3g02954 424 MobiDBLite consensus disorder prediction 214 239 - -
Lapu3g02954 424 MobiDBLite consensus disorder prediction 1 16 - -
Lapu3g02954 424 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Lapu3g02954 424 MobiDBLite consensus disorder prediction 1 28 - -
Lapu3g02954 424 MobiDBLite consensus disorder prediction 247 261 - -
Lapu3g02954 424 MobiDBLite consensus disorder prediction 404 424 - -
Lapu3g02954 424 SUPERFAMILY CAD & PB1 domains 47 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02954 Lapu-Chr3 52601144 52602804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02954 26 171 MAP Kinase Kinase Kinase AT5G57610 45.946 1.02e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02954 - - aprc:113858359 715.301