Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02948 ATGTTAGTTTATGAATATCTACCAAATAAAAGCTTAGACTTCTTCATATTCGATGAAAATCGAAGGTCATTACTAACTTGGGATAAGCGCTTTGAAATCATTTTGGGGATTGCTCGAGGTGTTTTATATCTTCACCAAGATTCAAGGTTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTGCTCCTTGACATTGCAATGAATCCCAAAATCTCAGATTTTGGCATGGCTAGAATATTTGGAGAAAATCAAATCCAAGCAAGGACGAAAAGAGTAGTTGGAACTTATGGTTATATGTCACCAGAATATGCAATGGATGGACGTTATTCAACAAAATCTGATGTCTTTAGTTTTGGGGTCGTACTCCTAGAAATTATTGTTGGCAAGAGAAATACTGATATTGAACAAGGAAGACCCTCCCCAAATTTGATTGGATATGTGTGGATACTTTGGACACAAGGAAGGACCTTGGATATAGTTGATTCAACACTACCTCAATCTTATCCTCTAGCTCTTGTTTTGAGGTGCATTCAAATTGGTCTATTGTGCGTGCAAGAAAATGCAACGAATAGACCTTCCTTATTAGAAGTTGTTTTCATGTTAGGTAATGAAACACCTCTTCCCCCACCCCAAAAGCCAGCATTTTTATTTAATGGAGATTTGCCCGAGTCATCAACATCAGGTGGAGGATCTTCAATAAATGAAGTAACAACAACAACTATTAGTGCTCGTTAG 738 0.3699 MLVYEYLPNKSLDFFIFDENRRSLLTWDKRFEIILGIARGVLYLHQDSRLKIIHRDLKASNVLLDIAMNPKISDFGMARIFGENQIQARTKRVVGTYGYMSPEYAMDGRYSTKSDVFSFGVVLLEIIVGKRNTDIEQGRPSPNLIGYVWILWTQGRTLDIVDSTLPQSYPLALVLRCIQIGLLCVQENATNRPSLLEVVFMLGNETPLPPPQKPAFLFNGDLPESSTSGGGSSINEVTTTTISAR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02948 245 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 7 210 - -
Lapu3g02948 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Lapu3g02948 245 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 241 - -
Lapu3g02948 245 PIRSF ILK 167 204 - -
Lapu3g02948 245 PIRSF ILK 1 143 - -
Lapu3g02948 245 Gene3D Transferase(Phosphotransferase) domain 1 7 207 - -
Lapu3g02948 245 SUPERFAMILY Protein kinase-like (PK-like) 1 219 IPR011009 -
Lapu3g02948 245 Pfam Protein tyrosine and serine/threonine kinase 1 199 IPR001245 GO:0004672|GO:0006468
Lapu3g02948 245 MobiDBLite consensus disorder prediction 221 245 - -
Lapu3g02948 245 SMART serkin_6 2 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02948 245 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02948 Lapu-Chr3 52553975 52555256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02948 1 240 Receptor kinase-like Gene Family AT4G05200 53.112 2.42e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu3g02948 PK_Tyr_Ser-Thr 3.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02948 - - mtr:11429525 405.601