Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02936 ATGAACAGACCTACCTTGATTTTCATAATAGGAATTTGTATAGGCTTTGTGGTTGGGATGGGTTTGACATTATCCGTAGTATTCTGCGTCGTAAGGGGGAGGAATCGCAAAAAGGTTGAAAAGAACATTTCTCGTATTGCAGTGACCATTCCTGTTAATGTCAAAGGGTTTGGTTCTAACTCCACATTATCAGAGGGCGAGGATTCACCCAGAACATCTGAGTGGAGTAACACGCCTTTATGGTTGGAAAATCTCAGGAGAAACAGTGCGGTGTCAGCATGTGGAATTCCCAAGTATTCTTACAAAGATGTACAAAGGGCTACTTCTAATTTCACCACCATAATTGGCAACGGAGCCTTTGGTCCTGTTTATAAAGCGCAGATGGCTACAGGTGAGACATTCGCAGTTAAAGTCCTAGGCTCTAATTCAAGACAAGGAGAACAGGAATTTTTAACTGAGGTAAATGATTTCGAAAAAAATCACGAGCCATTGATTTGGGATTTGAGGCTTGGCATTGCACTAGATATTGCAAGGGGACTGGAATATCTGCATTGTGGGGCTTCTCCTCCTGTTGTGCACCGTGACATCAAATCTTGCAACATACTGTTGGATCAGTCGATGAAGGCCAAGGCAGCCATGGAAGGTGAGGGTAAGGTTGGATGGGAAGAAATTGTGGATGGACAATTAAATGGAAAATATGATGTACATAATCTTAACGAGATGGCTTCACTTGCATTCATATGTGTTAATGAAGTCTCCGAAAGCCGACCACATATGTGCGAAATTGTTCAAGCATTGTCTCAGATTTGTAAGAGGCATAGTACAAATCTTGTCCAAACACCAGCTACTGCATTAAAGGACGTGTATATTGAAGTGGACCAGACTGGAACTAAGGACTTTACATCAACTGCGAGTACAAATATATTGAGCAGATTGCATAGCCGATGA 948 0.4198 MNRPTLIFIIGICIGFVVGMGLTLSVVFCVVRGRNRKKVEKNISRIAVTIPVNVKGFGSNSTLSEGEDSPRTSEWSNTPLWLENLRRNSAVSACGIPKYSYKDVQRATSNFTTIIGNGAFGPVYKAQMATGETFAVKVLGSNSRQGEQEFLTEVNDFEKNHEPLIWDLRLGIALDIARGLEYLHCGASPPVVHRDIKSCNILLDQSMKAKAAMEGEGKVGWEEIVDGQLNGKYDVHNLNEMASLAFICVNEVSESRPHMCEIVQALSQICKRHSTNLVQTPATALKDVYIEVDQTGTKDFTSTASTNILSRLHSR* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02936 315 SUPERFAMILY Protein kinase-like (PK-like) 93 265 IPR011009 -
Lapu3g02936 315 Gene3D Transferase(Phosphotransferase) domain 1 89 157 - -
Lapu3g02936 315 PANTHER OS01G0750732 PROTEIN 159 212 - -
Lapu3g02936 315 Pfam Protein tyrosine and serine/threonine kinase 161 211 IPR001245 GO:0004672|GO:0006468
Lapu3g02936 315 Gene3D Transferase(Phosphotransferase) domain 1 158 213 - -
Lapu3g02936 315 SMART tyrkin_6 109 266 IPR020635 GO:0004713|GO:0006468
Lapu3g02936 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lapu3g02936 315 ProSiteProfiles Protein kinase domain profile. 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02936 315 Gene3D Transferase(Phosphotransferase) domain 1 214 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02936 Lapu-Chr3 52389350 52392774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02936 95 244 Receptor kinase-like Gene Family AT3G19300 32.836 3.58e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lapu3g02936 PK_Tyr_Ser-Thr 1.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02936 - - gmx:100816549 314.309