Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02930 ATGGCTTCCCGCAATCACACCAGTAAAAAGGTGGGCCCTGAAGAAGCTTCTCTGGACAAGCGACGCAGGGTCATCGGAGCTGAGAAGATGGAGCGACAGGGCAGTGCCGCCGCTGTTGGGAGGCTTAGAACACCGTTTTCCGTGGTCACCAATCGCTCCGATCTTAACACGACGAATGATGTTACTGAGGTGGTTGATTTCACGAAAGACGAGGTGGAGGCTTTGCTGAATGAAAAGAAGAAGGGGAATACCTATGATAATAAGAAAAAGATGGAGCAGATGACGGATCTTATTAAGCGCCTTAAGGCCTGCGTTCGCTGGTATAAAAGGATTGAAGAAGGGCATGTTCAAGAAAAGGAAAAGCTTCAGTCTGAGCTAGAGGCTTCTGAGAAGAAGTGTAATGATACTGAGACTGAGATGAAGAATAAGATTGACGAGTCGGAGGAGACTATATCTAATTTGAGGAAGAGAATTTCTTCTCAGGAAGAGAGAATTGTGAAGGAAGAATCAGATAAATTGGAAGCGATTAATTCTTATGTTAAAGAAAAAGAAGCCAGAACTGAAGCTGAGAAAGTTCTGGATGAGAAATCATCTGAGCTTGAGAAAGTTCGGGATGAGAAATCAGTTGCTGAGAAGAAGGCCATTTCAAATGAAGATTTGTACAAGCGATCACAGGAGTATAATATGAGCTTGCAGCAGTACAATAGTCGTCTTCAGTTTGATCTTGAAACAGTTAATGAGGCCCATAAACGACTTGAAACCGAGAAAGCAACCATTGTTGAAAGCCTTAGCACTGTAAGAGGCCACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAGGACGAGGTTATAAAGCAGAAAGAGATTTTAGCAAATGAGCTCAAGTGTCTTCGTGAAGAGTTAAAACAAATTAGAGATGACCGTGATCGTCAATTGGGTCAAGTACATGCTTTAACTGGAGAAATAACAAGGTACAAAGAATATACTGGGAAAACATGTACACAATTGGATACGTTAATGATTAAGACAAATACTCTTGAGGAGACTTGTTCATCTCAAAAGGATCAAATACATATACTGCAGCAGCAATTGTTTGCTGAAAAAGAAAAATTTAAGAATGCTGATCTGTCAGCTTCAGAAACAAGAACAGTGTTTGAAGAGCAGAAGAGAATTATACTGGAACTACAGGATCGTTTGGCAGACAAAGAATTTCAAGTAATTGAAGGAGAGAACCTAAGGAAAAAACTGCATAACACTATCCTGGAGCTAAAAGGAAATATTCGTGTTTTCTGCCGTGTACGGCCGCTCCTACCAGATGACAGTACGGGAACAGACACGGTTGTTTCTTTCCCTACGTCAACAGAAACGCTTGGTCGGGGCATTGAATTGCTACAAAGCGGGCAGAAGTATAATTTCACATTTGACAAGGTGTTCAATCACGAGGCTTCTCAGCAGGACGTTTTTGTGGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCATATGGACAGACTGGTTCAGGCAAAACCTATACTATGATGGGTAGGCCTGATGCGCCAGATCTGAAAGGATTGATACCACGTTCTTTAGAACAGATATTCCAGACTAGCCAGTCTCTAAAAGATCAAGGGTGGAAGTACACAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGAGATTTGTTATCATCAAATCGGTCAAGTGATCATGCACGAACGGAAAATAGTGCTTCCAGCAAGCAGTACACTATCAAACATGATGCAAATGGAAACACACATGTTTCGGACCTCACCATAAAGGATGTTTGTAGCGCAGAGGAGATTTCCTCCCTCCTACAACAGGCTGCACAAAGCAGGTCAGTGGGAAGAACTCAGATGAATGAACAGTCGTCCAGAAGCCACTTTGTCTTTACACTGCGTATAACTGGAAAAAATGAGAACACTGAACAACAAGTCCAAGGTGTCTTAAACCTGATTGATCTTGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCAACTGGAGACCGGTTGAAGGAAACCCAGGCTATCAATAAAAGTCTATCGTCTTTGAGCGATGTCATATTTGCTTTGGGAGGAAAGAAAGAAGAGCATGTTCCTTTTAGGAATTCAAAGCTGACATACCTTCTCCAGCCATGTCTCGGTGGCGACTCCAAAACGTTGATGTTTGTCAACATATCACCTGATCAATCTTCAACTGGCGAGTCACTTTGCTCTCTCCGCTTTGCAGCCCGAGTCAATGCATGTGAAATCGGGATTCCACGGCGTCAGACTCATGCATCATCAACGCGCTCCTCAGAATCCCGTTTGAGCTACGGTTAA 2382 0.4282 MASRNHTSKKVGPEEASLDKRRRVIGAEKMERQGSAAAVGRLRTPFSVVTNRSDLNTTNDVTEVVDFTKDEVEALLNEKKKGNTYDNKKKMEQMTDLIKRLKACVRWYKRIEEGHVQEKEKLQSELEASEKKCNDTETEMKNKIDESEETISNLRKRISSQEERIVKEESDKLEAINSYVKEKEARTEAEKVLDEKSSELEKVRDEKSVAEKKAISNEDLYKRSQEYNMSLQQYNSRLQFDLETVNEAHKRLETEKATIVESLSTVRGHNKALQDQLVSLKVSQDEVIKQKEILANELKCLREELKQIRDDRDRQLGQVHALTGEITRYKEYTGKTCTQLDTLMIKTNTLEETCSSQKDQIHILQQQLFAEKEKFKNADLSASETRTVFEEQKRIILELQDRLADKEFQVIEGENLRKKLHNTILELKGNIRVFCRVRPLLPDDSTGTDTVVSFPTSTETLGRGIELLQSGQKYNFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYTMQASILEIYNETIRDLLSSNRSSDHARTENSASSKQYTIKHDANGNTHVSDLTIKDVCSAEEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRITGKNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALGGKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTGESLCSLRFAARVNACEIGIPRRQTHASSTRSSESRLSYG* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02930 793 SMART kinesin_4 428 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02930 793 MobiDBLite consensus disorder prediction 1 22 - -
Lapu3g02930 793 Coils Coil 112 171 - -
Lapu3g02930 793 Coils Coil 186 213 - -
Lapu3g02930 793 PANTHER KINESIN-LIKE PROTEIN KLP-3 94 777 IPR027640 GO:0003777|GO:0007018
Lapu3g02930 793 Gene3D Kinesin motor domain 372 771 IPR036961 -
Lapu3g02930 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 767 IPR027417 -
Lapu3g02930 793 ProSitePatterns Kinesin motor domain signature. 668 679 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu3g02930 793 Pfam Kinesin motor domain 436 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02930 793 ProSiteProfiles Kinesin motor domain profile. 430 769 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02930 793 FunFam Kinesin-like protein 376 771 - -
Lapu3g02930 793 Coils Coil 235 255 - -
Lapu3g02930 793 PRINTS Kinesin heavy chain signature 505 526 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02930 793 PRINTS Kinesin heavy chain signature 719 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02930 793 PRINTS Kinesin heavy chain signature 669 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02930 793 PRINTS Kinesin heavy chain signature 638 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g02930 793 MobiDBLite consensus disorder prediction 8 22 - -
Lapu3g02930 793 Coils Coil 284 318 - -
Lapu3g02930 793 CDD KISc_C_terminal 428 771 - -
Lapu3g02930 793 MobiDBLite consensus disorder prediction 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02930 Lapu-Chr3 52352414 52358718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02930 391 766 Calmodulin-binding Proteins AT5G65930 40.052 5.95e-77 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02930 K10405 - gmx:100780319 1285.4