Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02911 ATGGAGAACTATCAGCAGTACCCGTCCTACCCTGACTCCGGCGACTCCTCGCCGCGTTCCAGGGAGATCGACTTCGAGAACCCGCCACCGTGGGACGAGCAACAGAACCAGAGCTACAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCGCGAACTCACGACAATCAGCTCTCCTACGTTGGCGGCGACACCAAGATCCTCGCCGTCGACCGCACCATCAAGTTCCCCGCCTTCCTCTCCAAGCTAGCGGCGCTCTGCGACGCCACCCCGCAGGACCTCACCTTCAAGTACCAACTCCCCGGGGAGGACCTGGACGCCCTAATCTCCGTCACCAACGACGACGACCTGGAACATATGATGCACGAGTACGACCGTCTCTATCGCCCCAACTCCAAACCCGTCAGGATGAGACTCTTCCTCTTCACGCTTTCCTCAAACCCTAATTCCTCATTCTCCTCGGATCGCGATCGCTTCGTCGATGCTCTTAACTCAGCTCCAATTCCTCCGCAACCCGACCCCATCAAAACACCTCCCGTTACTCCTTCCAATGTCGATTACCTCTTCGGTCTCGACAAGGCCGTTGCTCCTCCCACTCTCCCTCCTTCCTTCGCCGCCGTTAAGTTTCACGATCCCGTGCCGGAGCCTGCCGCGCCGCAGCCGGAGTATCAGGTCCGCGGCGGAATTTCCGTTTCTGATCGCGTCCTGGGATCGGATCCGAATGCGAATTCCATCGAGATTCAGAGACAGCTGCAGCAGGAGATGCAGCGTTTGCAGATTGCTGAGAATGAATATCGGAGGAGGAGTGAGGATGGTTTTGCCGGTGGCTATGCCGCTGCAGGAGCGGATTATTACATGCAGAAGATGCCAGAGAAGGCTCCGCCCACTAATGCGCCCCATCCAGCCGGGTACTGGCCGGAGAAGCATTTTTCCGGCGAGGGTTTTCAGCCCACTGTGACGACTGCTCCCGGAGGTGCTGATCAGCAGGTATATGTTATCCCAGCACCGGGGACGTTCTACCACGCGCCGGTGGTAAGGCCTCAGGCAGCGCAGGGGTACTACGCGGTGCAGAGAATGGGGTCAGAGGGTTTCCGTGATCAGGCGGTGTACAGCGGCGTGGCTCCGCCGAAGACTGCGTTTTCGTCGGCGGGGTCAGCGCAGCCGGTTAAGGCTTCAGGGTATGCTGAGGGATACGGCGTTGTGAGGCCTGCTGGGGTGCCGGATAATGCGTCTTACACGCAGGTGGCGTATGATAGTGCGAGTGGGAGGCAGGTTTACTATACTGCGCAGGGAGGGGTGGTGCACGCGCCGCCGCAGTACCAAGGGGTTCCGCCGGTGGTGGGTTCGGATGTTAGGCCGGTTGGGGTTTCGGTGGGCCAGGATGTTAAGGTGGTTAACAAGGTTAACCAAGGTTCTGTGTGA 1428 0.5917 MENYQQYPSYPDSGDSSPRSREIDFENPPPWDEQQNQSYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRTIKFPAFLSKLAALCDATPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNSKPVRMRLFLFTLSSNPNSSFSSDRDRFVDALNSAPIPPQPDPIKTPPVTPSNVDYLFGLDKAVAPPTLPPSFAAVKFHDPVPEPAAPQPEYQVRGGISVSDRVLGSDPNANSIEIQRQLQQEMQRLQIAENEYRRRSEDGFAGGYAAAGADYYMQKMPEKAPPTNAPHPAGYWPEKHFSGEGFQPTVTTAPGGADQQVYVIPAPGTFYHAPVVRPQAAQGYYAVQRMGSEGFRDQAVYSGVAPPKTAFSSAGSAQPVKASGYAEGYGVVRPAGVPDNASYTQVAYDSASGRQVYYTAQGGVVHAPPQYQGVPPVVGSDVRPVGVSVGQDVKVVNKVNQGSV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02911 475 Gene3D - 61 145 - -
Lapu3g02911 475 PANTHER OS05G0427100 PROTEIN-RELATED 10 388 - -
Lapu3g02911 475 SMART PB1_new 55 146 IPR000270 GO:0005515
Lapu3g02911 475 MobiDBLite consensus disorder prediction 1 16 - -
Lapu3g02911 475 SUPERFAMILY CAD & PB1 domains 56 154 - -
Lapu3g02911 475 Coils Coil 246 273 - -
Lapu3g02911 475 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Lapu3g02911 475 CDD PB1_UP2 44 144 - -
Lapu3g02911 475 MobiDBLite consensus disorder prediction 1 35 - -
Lapu3g02911 475 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02911 Lapu-Chr3 52158130 52159794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02911 36 167 MAP Kinase Kinase Kinase AT5G57610 42.446 2.10e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02911 - - gmx:100810467 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02911 3 52158130 52159794 Lapu6g01128 6 11253805 11255573 PCT