LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu3g02901	ATGGCTTGGTGGTACAATGTGGTTTATAATCCAATTTTTTTCTGTCATGCAATGAGAACAATTTTCATCCTCCAAATAATCCCTCTAGCAAACTCACTGTCATTTGATTACCCCAACTTTAAGAATGGTGATGTAAAATGGGAAGGGGATGCTTCTATTCTGAAAGGAGCTATCCAAGTCACGTCCAACACCATGGACCAAAACAACAATTACAGTGTTGGGAGAGTCACAAGTTATGAACAGATGCTCCTCTGGGATATCAACTCTGGAAAGCTTGCTGATTTCACTACTAAATTTTCCTTTGTTATTTTTTCAGAAAAGAGGTATTATGGAGATGGAATGGCATTCTTCCTGGCTGATCCTAATCTCCCACTTCTAAAGGATGTAAAAGAAGGAGGTGGTCTTGGCCTTGTGGATGGTGAACAAGTACTGAATTCAACTCAATACCCCTTTGTAGCTGTGGAGTTTGACACCTTCCACAACAAATTATGGGACCCTCAAGGTGGTACTCATGTAGGTCTGAATTTCAACTCTATGAAGTCTAACATAACTAAGCCATGGTTGACAGATATTCAAATTTGGAATGTTTATAATTGCAGCATTAAGTACAATTCACGTACTCTAAATTTGAGCGTTTCATTCACCATGTACAATGATAGTAAACCAGTTGAAGAATACACTTCATACAAGGTTGATTTGAGAGATTACCTACCAGGGAGGGTTATTCTTGGTTTTTCCGCCGCAACAGGAAAATTGTATGAGGTGCATACATTGAGATCATGGTCATTTAGTTCAAGTCTACAAAGCATTGAGATAAAACCAGAAGCAGTCCCACCAGATGCCAATCCTATTTCTGAAAAAGGAAAGAAAATAGGATTGTGGGTAGGGCTTGGAATTGGTGTAGGCTTGGTTTCGAGTTTGTCAGGGCTGATTTGTACTATATTGTGGAAGAGGAGTAGAGGTAGAAAAGAAGAGTTAGCTTTTGATCTTAACATGGGTGATGAATTCCCAAAGGGCACCGGACCTAAGAGCTTTTCCTATAATGAGCTAGCAAATGCTACAAACAAATTTGCCGAGTCTGAGAAGCTGGGGCAAGGTGGTTTTGGGGGTGTGTATAAAGGTTATCTGAAAGACACAAAGTCCTATGTTGCTATCAAGAGGATATCAAGAGAGTCTAGACAGGGAATGAAGGAGTATGTGACAGAAGTGAAGGTAATAAGCCAATTGAGACATAGGAATTTAGTACAACTTATTGGTTGGTGTCATAGGAAGAATGACTTTGTCCTAGTATATGAGTTCATGCCAAATGGAAGCTTAGATTCTCATTTGTATGGTGTGAAAAGCTTCTTAAGTTGGACAGTGAGGTATAATATAGCTTTGGGCTTGGCTTCAGCATTGCTTTACCTACAAGAAGAGTGGGAGCAGTGTGTGATTCACAGGGATATTAAATCAAGCAACATTATGTTGGATTCAAGTTTCAATGCAAAGCTTGGTGATTTTGGTTTGGCTAGGCTGGTGGACCATGAGAAAGGGTCACAAACAACACATATAGCCGGGACTAGGGGCTATATTGCCCCTGAATATTTCACTTCAGGAAAGGCTACTAAGGAATCTGACATATACAGTTTTGGTGTTGTGTTATTGGAGATAGCTAGTGGAAGAAAACCTGTTGAACTAGAAGCTGAGGATGGTCAAATAACTGTAGTTGAGTGGGCTTGGAAGCTCTATGGAATGGGGAGGTTGCTTGAAGCTGCTGACCCAAAGTTATGTGGAGAATTTGATGAGAGGCAAATGGGACGTTTAGTGGTTGTTGGCCTTTGGTGTGTTCATCCAGATTACTCATTCAGGCCTTCTACAAGGCAAGTGATTCAGGTTCTTAAATTTGATTCTCCTTTACCCATTCTCCCTGAAATGATGCCTGTGCCAACCTATCTTCCTCCAACAATAAAAGCACTTTTTTCTTCAGTTTCGTCTTTCTTCTGGGAAACAAGTTAG	1995	0.4035	MAWWYNVVYNPIFFCHAMRTIFILQIIPLANSLSFDYPNFKNGDVKWEGDASILKGAIQVTSNTMDQNNNYSVGRVTSYEQMLLWDINSGKLADFTTKFSFVIFSEKRYYGDGMAFFLADPNLPLLKDVKEGGGLGLVDGEQVLNSTQYPFVAVEFDTFHNKLWDPQGGTHVGLNFNSMKSNITKPWLTDIQIWNVYNCSIKYNSRTLNLSVSFTMYNDSKPVEEYTSYKVDLRDYLPGRVILGFSAATGKLYEVHTLRSWSFSSSLQSIEIKPEAVPPDANPISEKGKKIGLWVGLGIGVGLVSSLSGLICTILWKRSRGRKEELAFDLNMGDEFPKGTGPKSFSYNELANATNKFAESEKLGQGGFGGVYKGYLKDTKSYVAIKRISRESRQGMKEYVTEVKVISQLRHRNLVQLIGWCHRKNDFVLVYEFMPNGSLDSHLYGVKSFLSWTVRYNIALGLASALLYLQEEWEQCVIHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTHIAGTRGYIAPEYFTSGKATKESDIYSFGVVLLEIASGRKPVELEAEDGQITVVEWAWKLYGMGRLLEAADPKLCGEFDERQMGRLVVVGLWCVHPDYSFRPSTRQVIQVLKFDSPLPILPEMMPVPTYLPPTIKALFSSVSSFFWETS*	665

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu3g02901	664	Gene3D	Phosphorylase Kinase; domain 1	342	433	-	-
	Lapu3g02901	664	FunFam	L-type lectin-domain containing receptor kinase IX.1	342	433	-	-
	Lapu3g02901	664	ProSitePatterns	Legume lectins beta-chain signature.	152	158	IPR019825	-
	Lapu3g02901	664	Pfam	Legume lectin domain	32	270	IPR001220	GO:0030246
	Lapu3g02901	664	Pfam	Protein kinase domain	358	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu3g02901	664	PANTHER	-	59	628	-	-
	Lapu3g02901	664	CDD	STKc_IRAK	363	627	-	-
	Lapu3g02901	664	Gene3D	-	30	276	-	-
	Lapu3g02901	664	Gene3D	Transferase(Phosphotransferase) domain 1	434	645	-	-
	Lapu3g02901	664	ProSiteProfiles	Protein kinase domain profile.	357	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu3g02901	664	SUPERFAMILY	Protein kinase-like (PK-like)	341	650	IPR011009	-
	Lapu3g02901	664	SMART	serkin_6	357	632	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu3g02901	664	CDD	lectin_legume_LecRK_Arcelin_ConA	33	261	IPR001220	GO:0030246
	Lapu3g02901	664	SUPERFAMILY	Concanavalin A-like lectins/glucanases	31	276	IPR013320	-
	Lapu3g02901	664	ProSitePatterns	Protein kinases ATP-binding region signature.	363	386	IPR017441	GO:0005524
	Lapu3g02901	664	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Lapu3g02901	664	FunFam	Lectin-domain containing receptor kinase A4.3	434	646	-	-
	Lapu3g02901	664	FunFam	L-type lectin-domain containing receptor kinase IX.1	31	275	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu3g02901	Lapu-Chr3	52021023	52023017	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu3g02901	22	644	Receptor kinase-like Gene Family	AT5G10530	47.418	0.0	539

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lapu3g02901		Pkinase	8.4e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu3g02901	-		-	gmx:100780181	1142.1