Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02900 ATGTTGGACTCCAACTTCAATCCTAAGCTTGGTGACTTTGGCCTAGCTAGGCTGGTGGATCACGATAAAGGGTCAGAAACCACAGACGTGGCTGGGACCATGATGGGTTACTTAGCTCCTGAATACATGAACACAGGCCAAGCTCGAAAAGAATCTGACATATTCAGTTTTGAGGTTGTTATGTTGGAGATAGCCACCGGAAGAAAAGCCATTCACCACAAACACATGGAGGGTGAGGACTCAGTGGTTGAGTGGGTGAGGAGGCTCTACGGATTGAGAAATCTGCTTGCAGCAGCAGATGCAAACCTGGTCAACATCATCACTTTGCTTGATCAAGCTTTTAAGATAAAGAATCTTGGCAACCTCACCTACTATCTCGGACTCGAGGTGGCAAGGAGTACTAAAGGAGATGTCTATTATGACCAAGAAGTCCTCAAACTCACCAAAAATGAACAACGTAGTTACGGTAGAGTCGTATATCCCCAACTATTGCATCTTTGGGACAAAAACTCAGGGAAACTCGCGGATTTCTCTACCCATTTCTCCTTTACCATCAACGCTCTAAATAAAACCCAAGCAGATGGCATCACCTTCTTTCTCGCACGTCCAGACTTTCCATCGCCTTCTCCAAGAGATGGCGCTGGTATAGGTCTTTCGAGCCGTGATCAACTGATAAATCCAAGTTATGCAAAGGAACATCCATTTGTTGCAGTTGAATTTGATACCTATGTTAACCCGTGGGATCCTGATTATCCCCATGCGGGTATCAATGTTAATGCAATCAGCAGTCCTGACACTGCACAGTGGTTCACTGTCTTGGGTGAGATAGGATATGCTGCTGATATTACTTTCGATTCCAGTTCAAACAAATTAAGTGTCACCTTCACTGGGTTTAAGGCTAACGTCGTAATTAAACATAACTTATCCTCTGTGATCAATCTGAGAGACATCTTACCTGATTGGGTTGAATTTGGCTTCTCTTCAGCAACAGGAGATGCTTACGCAGAACATGGTCTTATATCCTGGTCCTTCAACTCTAGTTTGGAGATGGAACCACACGACGGTGGAAGCAAAAGAGGGCTGGAGATACGGCTGGGCGCTGGACTTGGTGTAGGTCTTTTAATTGTTATCTTGGGGGTAACATTTCTTGTGAGATGGATGCTGAGGACTAGAGGTATGGAAGATGTCTCACTTTTTGATCATGCTATGGACAATGATTTTGAAAAAGTGTCTCTACCCAAGAAGTTTTCGTACGAAGAACTGGCCAGAGCAACTAATAACTTTGCAAGAGAAAACAAAATAGGACAGGGAGGTTTTGGAGCCGTCTACAGGGGATTTATTAGAGAGTTGAACGCCGATGTTGCCATTAAGAAGGTATCTCGTGAATCTACACAAGGGGTGAAGGAGTACATATCTGAAGTAAAGATTATCAGTCAACTGAGACATAAAAATTTGGTTCAGCTCTTTGGGTGGTGCCATCAGCATAATGACCTGTTGCTGATTTACGAGTTCATGGAAAATGGAAGCTTGGATTGTTATCTGTTTAAGGGAAAAGGCCTGCTGACATGGAAAGTGAGATATAATATTGCCAGAGGCTTGGCATCGGCATTGTTGTACCTGCATGAAGAGTGGGAAGAATGCGTTCTTCATAGAGACATAAAATCCAGCAATGTTATGCTGGATTCTGATTTTGATGCAAAACTTGGAGATTTTGGGTTAGCGAGACTAATGGATCATGGGATAAGATCAAAAACAACTATTTTAGCAGGAACAATTGGGTATTTTCCTCCTGAAGCTCTCACAAGAGGCAAGGCTAGTAGGGAGTCTGATGTGTACAGCTTTGGAGTTGTTGCTTTGGAGATAGCCTGCGGTAGAAAGGCCATTGAAGCTAATATGAGTGAAGAAGATATCTGTTTGGTTGATTGGGTTTGGAAACTCCATGGCATGGGTGATCTCCTTAAAGCATGTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGAGTTTAATGATAGTTGGGCTTTGGTGCACTCACACAGATTACCTTCTGAGGCCTACAATTAGGCAAGTTGTTCAACTGCTTAGTTTTGAAGTTCCGCTGCCTACTCTGGCTCCACGCCTGCCATCCTTTACCTATAACACATCATTCATCTCTATGGCCTCTACCTCTTCTCCAGGAACTGCACGTTTACATACCTACTAA 2211 0.4346 MLDSNFNPKLGDFGLARLVDHDKGSETTDVAGTMMGYLAPEYMNTGQARKESDIFSFEVVMLEIATGRKAIHHKHMEGEDSVVEWVRRLYGLRNLLAAADANLVNIITLLDQAFKIKNLGNLTYYLGLEVARSTKGDVYYDQEVLKLTKNEQRSYGRVVYPQLLHLWDKNSGKLADFSTHFSFTINALNKTQADGITFFLARPDFPSPSPRDGAGIGLSSRDQLINPSYAKEHPFVAVEFDTYVNPWDPDYPHAGINVNAISSPDTAQWFTVLGEIGYAADITFDSSSNKLSVTFTGFKANVVIKHNLSSVINLRDILPDWVEFGFSSATGDAYAEHGLISWSFNSSLEMEPHDGGSKRGLEIRLGAGLGVGLLIVILGVTFLVRWMLRTRGMEDVSLFDHAMDNDFEKVSLPKKFSYEELARATNNFARENKIGQGGFGAVYRGFIRELNADVAIKKVSRESTQGVKEYISEVKIISQLRHKNLVQLFGWCHQHNDLLLIYEFMENGSLDCYLFKGKGLLTWKVRYNIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSDFDAKLGDFGLARLMDHGIRSKTTILAGTIGYFPPEALTRGKASRESDVYSFGVVALEIACGRKAIEANMSEEDICLVDWVWKLHGMGDLLKACDPSLYGHFDEKEMESLMIVGLWCTHTDYLLRPTIRQVVQLLSFEVPLPTLAPRLPSFTYNTSFISMASTSSPGTARLHTY* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02900 736 SMART serkin_6 428 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02900 736 FunFam L-type lectin-domain containing receptor kinase IX.1 413 504 - -
Lapu3g02900 736 Pfam Protein tyrosine and serine/threonine kinase 2 86 IPR001245 GO:0004672|GO:0006468
Lapu3g02900 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Lapu3g02900 736 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Lapu3g02900 736 Gene3D Transferase(Phosphotransferase) domain 1 505 716 - -
Lapu3g02900 736 CDD STKc_IRAK 434 697 - -
Lapu3g02900 736 PANTHER - 1 105 - -
Lapu3g02900 736 Gene3D - 130 357 - -
Lapu3g02900 736 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02900 736 Pfam Legume lectin domain 136 352 IPR001220 GO:0030246
Lapu3g02900 736 SUPERFAMILY Protein kinase-like (PK-like) 412 712 IPR011009 -
Lapu3g02900 736 FunFam Lectin-domain containing receptor kinase A4.3 505 717 - -
Lapu3g02900 736 CDD lectin_legume_LecRK_Arcelin_ConA 144 348 IPR001220 GO:0030246
Lapu3g02900 736 SUPERFAMILY Protein kinase-like (PK-like) 1 88 IPR011009 -
Lapu3g02900 736 Pfam Protein kinase domain 429 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02900 736 ProSitePatterns Legume lectins beta-chain signature. 236 242 IPR019825 -
Lapu3g02900 736 SUPERFAMILY Concanavalin A-like lectins/glucanases 135 352 IPR013320 -
Lapu3g02900 736 Gene3D Phosphorylase Kinase; domain 1 413 504 - -
Lapu3g02900 736 ProSiteProfiles Protein kinase domain profile. 428 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02900 736 ProSitePatterns Protein kinases ATP-binding region signature. 434 458 IPR017441 GO:0005524
Lapu3g02900 736 ProSitePatterns Legume lectins alpha-chain signature. 318 327 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02900 Lapu-Chr3 52007235 52016867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02900 156 716 Receptor kinase-like Gene Family AT5G10530 46.181 4.05e-157 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu3g02900 Pkinase 7.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02900 - - var:108318726 960.674