Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02865 ATGATGGGAAGAGTTCAGGGAGAGAAGGACGACATAAAAGTGACATGGGAGAATTTGTGGGTCACTGTTTCAAGTGGAAAGAAAAAAAAGCCAATTCTGCAGGGCCTTACCGGTTATGCTAGCCCAGGGAGGATTCTTGCCATAATGGGCCCTTCAGGATGTGGAAAATCTACTCTTCTTGATAGTTTAGCAGGAAGATTGAGCTCAAAAATGAAGCATACTGGAAAAATTCTAATCAATGGCCAGAAACAAACACTAGCCTATGGGACCTCAGGCTATGTAACACAAGAAGATGCTATGCTGTCAACTTTAACCACTGAGGAAACTTTATACTACTCTGCTCAGCTCCAGTTTCCAGATTCCATGTCCACAGCAGAGAAGAAGGAACAAGCAGATATCACACTCAGAGAAATGGGTCTGCAGGGTGCCATTAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATTGAAATTCTAACACGGCCAAGGCTCCTCTTCCTTGATGAGCCAACAAGTGGACTTGATAGTGCGGCTTCCTATTATGTTATGAGTAGCATTGCAACTCTAAATCTGAGAGATGGAATTCGAAGGACTATTGTTGCTTCCATCCATCAGCCTAGCAGTGAAGTTTTTGAACTTTTTCATGACCTCTGTCTTCTGTCTTCTGGTGAAACTGTATATTTTGGTCCAGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCATGCCCAACTCTCCACAATCCTTCTGATCACTACTTAAGGATCATAAATAAAGATTTTGAACAGGATGCTGAAGAAGGCTTTGGTAAGGGAGTAAGCACAGAAAAAGCAATTGAAACCCTTGTAAAGTCTTACCGGTTGTCTCAAGTAAGAAATCAAGTTAAAAGGGAAGTGGAAAAAATAGTTGAAAGTGATTCTTGTGAAACAAGGAAGAAGAGAACTCATGCTGCATTTCCTACTCAATGCCTTGTTCTTATCAGAAGATCCTCATTGCAATTCTTTCGTGACATAAGCAATTACTGGCTACGTTTAATTGTCTTTATTGTAATAGCTATAAGCATTGGATCTATCTTCTATAACATAGGCACAGACAATGGATCTATTCAGGGGAGAGGTTCGCTTCTCATATTTCTTGTTTCGGTTCTGACTTTCATGACCCTTGTTGGTGGATTTTCTCCACTCTTGGAGGAAATGAAGGTATTTGAACGAGAGAGGTTGAATGGGCACTATGGTATCACAGCATTTCTCATAGGCCATGTATTCTCCGCTGTTCCTTACATGCTAATGATCTCTCTTATTCCTGGAGGAATAGCTTACCACCTTTGTGGGTTGCACAAAGGAATAGATCGCTTCTTATACTTCACTTCTTTGCTATTTGCCATAGTGATGTGGGTTGAGAGCCTTATGTTGGTGATTGGAAGCATCTCCCCCAACTATGTGATAGGCATGTTCCTTGCTGGTGGAGTTGAAGGACTGATGATCTTAACAGGTGGATTCTATAGACTGCCAAATGATCTTCCAAAGCCATTATGGAAGTACCCTTTCTACTATGTTTCCTTCCTCAAGTATGCCTTCCAAGGATCCTTCAAGAATGACTTTGATGGCCTAACATTTTCAGTAAACCTAGATGGAGGAGGCACTGCAAGCGTGAGTGGTAGAGAAGTACTAGCTCACACATGGCACGTGGAAATGACTCACTCTAAGTGGGTTGATCTTGCAATCATGTTTGGAATGATTATTCTGTATCGAGTTCTGTTCTTGGTCATCACTAAGTTCAAGGAGAAGCTCAAGCCTTTTCTTGCATCCATTACTCTTTGCCCTTGA 1869 0.4195 MMGRVQGEKDDIKVTWENLWVTVSSGKKKKPILQGLTGYASPGRILAIMGPSGCGKSTLLDSLAGRLSSKMKHTGKILINGQKQTLAYGTSGYVTQEDAMLSTLTTEETLYYSAQLQFPDSMSTAEKKEQADITLREMGLQGAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSSIATLNLRDGIRRTIVASIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGKGVSTEKAIETLVKSYRLSQVRNQVKREVEKIVESDSCETRKKRTHAAFPTQCLVLIRRSSLQFFRDISNYWLRLIVFIVIAISIGSIFYNIGTDNGSIQGRGSLLIFLVSVLTFMTLVGGFSPLLEEMKVFERERLNGHYGITAFLIGHVFSAVPYMLMISLIPGGIAYHLCGLHKGIDRFLYFTSLLFAIVMWVESLMLVIGSISPNYVIGMFLAGGVEGLMILTGGFYRLPNDLPKPLWKYPFYYVSFLKYAFQGSFKNDFDGLTFSVNLDGGGTASVSGREVLAHTWHVEMTHSKWVDLAIMFGMIILYRVLFLVITKFKEKLKPFLASITLCP* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02865 622 FunFam ABC transporter G family member 11 12 299 - -
Lapu3g02865 622 ProSitePatterns ABC transporters family signature. 156 170 IPR017871 GO:0005524|GO:0016887
Lapu3g02865 622 Pfam ABC transporter 34 184 IPR003439 GO:0005524
Lapu3g02865 622 Pfam ABC-2 type transporter 335 546 IPR013525 GO:0016020|GO:0140359
Lapu3g02865 622 Gene3D - 13 342 IPR027417 -
Lapu3g02865 622 Pfam ABC-2 type transporter 216 273 IPR043926 GO:0140359
Lapu3g02865 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 250 IPR027417 -
Lapu3g02865 622 CDD ABCG_EPDR 12 241 - -
Lapu3g02865 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 259 IPR003439 GO:0005524
Lapu3g02865 622 SMART AAA_5 42 235 IPR003593 GO:0016887
Lapu3g02865 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 11 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02865 Lapu-Chr3 51582478 51586493 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02865 32 198 Calmodulin-binding Proteins AT2G36910 33.714 8.77e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02865 K05681 - gmx:100790102 1073.54