Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02863 ATGTTCATGTGGGCATTAATAGTCCCCACGCAAAAATTTTCTCCAGAACCAACATCGTTGAGAGTGAAATGGATGACTATAATGCAGCTTGCTTCTTTCAATATAAATAATCACCTCGCATCAGAATCTGCTCAAATCAGTACAATGCACATGGAAGAAGAGAGCGACATTACGGTGACATGGGAGAACTTGGAGGCGAGTGTAACAAGTGGAAATAATAGAAAATTAATTCTGAATGGTCTCACAGGTTATGCCCAACCAGGGAAGCTTTTGGCCATCATCGGTCCTTCAGGCTCTGGCAAATCAACTCTTCTTGATGCTTTAGCAGGAAGATTAGGATCAAACATCAAGCAAACTGGCAACATTCTAATCAATGGCCACAAACAACGACTGGCCTACGGAACTTCTGGCTATGTCACACAAGATGATGCCATGCTATCATGTTTAACAGCTGGGGAAACTTTGTACTACTCAGCTCAGCTCCAATTTCCAAACACCATGTCTATAGCTGAGAAGAAGGAACGAGCAGATGTCACACTCAGAGAAATGGGTCTGCAAGATGCCATCAACACAAGGGTTGGAGGGTGGAGCTGTAAAGGCCTGAGTGGGGGACAGAAGAGGAGACTTAGCATATGCATTGAGATTCTAACACATCCAAGACTCCTCTTCCTTGATGAACCAACCAGTGGCCTTGACAGTGCAGCTTCCTATTATGTTATGAGTGGAATTGCAAGTCTCGTTCTAAAGGATGGAATTCAAAGGACTATTGTTGCCTCCATCCACCAGCCTAGCAGTGAGGTTTTCCAACTTTTTCATGATCTTTGTCTTCTGTCTTCCGGAGAGACAGTATATTTTGGACCTGCCTCTGATGCAAATGAGTTTTTTGCTTCAAATGGTTTTCCATGCCCTCCTCTCTACAATCCTTCAGATCATTACCTAAGGATCATAAACAAAGATTTCAATCAGGATGCTGACGTGGGAATTACAACTGAAGAAGCAACTGATATCCTTGATTCCGGTGCAGTTGGAAAGAAGAAGATCCACGCTTCATTCCTCACTCAGTGTCTGGTTCTTCTCAAAAGATCTTCGAAGCAAATCTATCGTGATATAAGCAATTACTGGTTACGCCTAACTGTCTTTATCGCAATATCTGTAAGCATGGGCTCTATCTTCTATAACATTGGTCCAAGTATGAGATCAATTCAGGAAAGAGGATCGTTGCTTTGTTTTTTCGTTTCAGTTCTGAGTTTCATGACACTTGTCGGTGGATTTTCTCCGTTGATCGAGGAAATGAAGGTGTTTAAGAGAGAGAGATTGAATGGACACTATGGTATAGCAGCTTTTCTAGTAGGGAACACATTTTCTGCTGTTCCTTACACACTACTGATATCTTTGATTCCCGGAGCTATTGTTAATTATCTTTCTGGACTACACAAAGGAGTAGAGAACTTTCTATACTTTGCTTCTGTCCTATTTGCTATTGTGACGTGGGTTGATAGCCTTATGATGGTTGTTGGGAGCATCTTCCCAAATTTTGTGATGGGTGTGATCACTGCTGGTGGAGTTGAAGGACTCATGATTTTGACAAGTGGATTCTACAGACTGCCAAATGATCTTCCCAAACTATTATGGAAATACCCTTTCTACTATGTTTCCTTCCTCACCTATGCTTTCCAAGGATTGTTAAAGAATGAATTTGAAGGCTTAATATTTACTTGGGATCAGGATGAAGGTACCAAAAGTGTTAGTGGTAGAGATATACTGCTTGAGACATGGCATGTGCAAATGGGTCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGTATGATTGTTCTATATAGAGTTCTATTCTTGGTCATCACTAAATGCAAGGAGAAATTGAAACATGTTCATGTTGGCACTAATCCTCAAGCAAAAGTTTTCTCCAGAACTCACCTCAATGAACTGTAG 1953 0.4132 MFMWALIVPTQKFSPEPTSLRVKWMTIMQLASFNINNHLASESAQISTMHMEEESDITVTWENLEASVTSGNNRKLILNGLTGYAQPGKLLAIIGPSGSGKSTLLDALAGRLGSNIKQTGNILINGHKQRLAYGTSGYVTQDDAMLSCLTAGETLYYSAQLQFPNTMSIAEKKERADVTLREMGLQDAINTRVGGWSCKGLSGGQKRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSGIASLVLKDGIQRTIVASIHQPSSEVFQLFHDLCLLSSGETVYFGPASDANEFFASNGFPCPPLYNPSDHYLRIINKDFNQDADVGITTEEATDILDSGAVGKKKIHASFLTQCLVLLKRSSKQIYRDISNYWLRLTVFIAISVSMGSIFYNIGPSMRSIQERGSLLCFFVSVLSFMTLVGGFSPLIEEMKVFKRERLNGHYGIAAFLVGNTFSAVPYTLLISLIPGAIVNYLSGLHKGVENFLYFASVLFAIVTWVDSLMMVVGSIFPNFVMGVITAGGVEGLMILTSGFYRLPNDLPKLLWKYPFYYVSFLTYAFQGLLKNEFEGLIFTWDQDEGTKSVSGRDILLETWHVQMGHSKWVDLAIMFGMIVLYRVLFLVITKCKEKLKHVHVGTNPQAKVFSRTHLNEL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02863 650 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Lapu3g02863 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 304 IPR003439 GO:0005524
Lapu3g02863 650 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
Lapu3g02863 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 47 322 - -
Lapu3g02863 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 295 IPR027417 -
Lapu3g02863 650 Gene3D - 46 298 IPR027417 -
Lapu3g02863 650 SMART AAA_5 87 276 IPR003593 GO:0016887
Lapu3g02863 650 Pfam ABC-2 type transporter 261 329 IPR043926 GO:0140359
Lapu3g02863 650 Pfam ABC-2 type transporter 353 566 IPR013525 GO:0016020|GO:0140359
Lapu3g02863 650 FunFam ABC transporter G family member 11 57 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02863 Lapu-Chr3 51562706 51572080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02863 59 265 Calmodulin-binding Proteins AT2G36910 30.374 6.02e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02863 K05681 - gmx:100820615 973.385