Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02861 ATGGCTTCCTTTCTTCCATATAATTCGCATGCTCCCAGTGATTATGAAACTAAACCTAACTCATCAAGTGTTGAATCCACTACACTGGAGATAGAAGAAGCATGCAGTGCTCCAAAACCAAAAGGGACCAAACGAGGAGAAACTTCAGGTTGGAGTAAAGAGAGAGAAAAGGTAGGTATGTGCTTGACATGGAAAGATGTATGGGTGACTGCTTCTGTGGGAAAAAATGGAAGCAAATCAATTCTGCAGGGTCTCACTGGTTATGCCAAACCAGGGCAGCTCTTGGCCATAATGGGTCCTTCTGGTTGTGGAAAGTCCACACTTCTTGATGCCTTAGCTGGGAGATTAGGTTCTAACACAAGGCAAACTGGGGAGATTCTTATCAACGGCAAGAAACAAGCACTGGCATATGGAACCTCAGCATATGTTACACAAGACGATACCTTGTTGACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTACCTGACACCATGTCCAAAGAAGAGAAAAAAGAGAGAGCAGACTTTACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGATGGGGTGTTAAAGGAATAAGTGGGGGTCAGAAAAGGAGAGTGAGCATTTGCATTGAGATTCTAACACGACCAGGGCTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCATCCTATTATGTCATGAAAAGAATCGCTACCCTTGATAAAAGAGATGACATTCACAGAACTGTTATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCACAACCTTTGTCTTCTATCTTCAGGTAGAACTGTTTACTTTGGACCTGCTTCTGCTGCAAGTGAGTTTTTCGCTTCAAATGGTTTTCCTTGTCCTTCTCTCATGAATCCATCAGATCATTTACTGAAAACCATAAACAAGGATTTCGATCAGGACATTGATTTGAGTTTAGGAGGGAATGAAACAATACCCACCGAAGAAGTGATTCAGATCCTTGTAAATTCGTACAAGTCATCTGAAATGAACCAAGAAGTTCAGAAAAAAGTAGCAGAACTAACTGAAAAGGACACCGATTCAACAAACAAGAAGAGAAGGCATGCTGGCTTCCTTAATCAGTGTTTTGCTCTTACCGAAAGATCATCCATTAACATGTATCGTGATCTAGGCTATTATTGGTTACGCCTTGCCATATATGTTGCATTGGCTATAAGTTTAGCCACTATTTTCTATGATCTGGGTACAAGTCATCGGTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTATCTTCATTCATAACTTTCATGACCATTGGCGGATTCCCTTCGTTTGTGGAGGATATGAAGGTGTTTGAACGTGAAAGACTAAATGGACATTACAGTGTGACTGCGTTTGTGATTGGGAACACCTTTTCATCAATCCCATTCTTGTTGTTGGTTTCACTCATTCCTGGATCTATAGCCTATTACCTTCCTGGTCTTCAGAAAGATTTTGAACATTTTGTATATTTCATCTGTGTTCTCTTTTCTTGTCTGATGTTGGTAGAGAGCCTTATGATGATAGTTGCAAGCATTGTCCCCAACTTTCTAATGGGCATCATAACTGGAGCTGGAATTCAAGGAATGATGATTTTGGGTGGTGGGTTCTTCAGATTACCAAGAGATCTTCCAAGGCCATTTTGGAAATACCCAATGTTCTATGTTGCCTTCCATAGATACGCCTACCAAGGATTGTTCAAAAACGAGTTTGAAGGACTAAGATTCGATGCAAATGATGTACAAGGTGGCTCCTACGTTACTGGTGAAGAAATTCTGACAAATACGTGGGAAGTAAACACGAGTTACTCAAAGTGGGTTGATCTTGGAATCTTGGTGGGGATGATTATTCTGTATCGAGTTCTCTTCTTGGTTAACATCAAAACTACTGAGAAGCTGAAGCCAATCATGGTATCATTCATGTCATCAAGAACTTCTCCCAAGCGAACAATATCGATCATGCAGAATCCCAATACCACTCCTTTTCAAGAAGTTATCTAA 2082 0.4063 MASFLPYNSHAPSDYETKPNSSSVESTTLEIEEACSAPKPKGTKRGETSGWSKEREKVGMCLTWKDVWVTASVGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRQTGEILINGKKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPGLLFLDEPTSGLDSAASYYVMKRIATLDKRDDIHRTVIASIHQPSTEVFQLFHNLCLLSSGRTVYFGPASAASEFFASNGFPCPSLMNPSDHLLKTINKDFDQDIDLSLGGNETIPTEEVIQILVNSYKSSEMNQEVQKKVAELTEKDTDSTNKKRRHAGFLNQCFALTERSSINMYRDLGYYWLRLAIYVALAISLATIFYDLGTSHRSIQDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFERERLNGHYSVTAFVIGNTFSSIPFLLLVSLIPGSIAYYLPGLQKDFEHFVYFICVLFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGMMILGGGFFRLPRDLPRPFWKYPMFYVAFHRYAYQGLFKNEFEGLRFDANDVQGGSYVTGEEILTNTWEVNTSYSKWVDLGILVGMIILYRVLFLVNIKTTEKLKPIMVSFMSSRTSPKRTISIMQNPNTTPFQEVI* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02861 693 MobiDBLite consensus disorder prediction 1 52 - -
Lapu3g02861 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 297 IPR027417 -
Lapu3g02861 693 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Lapu3g02861 693 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Lapu3g02861 693 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 308 IPR003439 GO:0005524
Lapu3g02861 693 FunFam ABC transporter G family member 11 60 350 - -
Lapu3g02861 693 SMART AAA_5 91 280 IPR003593 GO:0016887
Lapu3g02861 693 Gene3D - 51 303 IPR027417 -
Lapu3g02861 693 MobiDBLite consensus disorder prediction 13 30 - -
Lapu3g02861 693 Pfam ABC-2 type transporter 265 380 IPR043926 GO:0140359
Lapu3g02861 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 49 670 - -
Lapu3g02861 693 Pfam ABC-2 type transporter 387 598 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02861 Lapu-Chr3 51531188 51535858 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02861 81 293 Calmodulin-binding Proteins AT2G36910 28.767 1.78e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02861 K05681 - gmx:100813462 1195.65