Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02858 ATGAATTTCCTTCTTAATCCTCCAATTCAATGCAATGCCACTAACTATGAATCCCCCATCAGTAGTCCTACTCCTTTGATTATGCAGTCCAATCAGGAGTTTGTTGCCACAATTGAGGAAGAGAGAAACACAAGTACCAAGACAAAGGTAGAGGGTATCTTCCTCACATGGGAGGATTTGCAGGTCACAGTCCCAAATGGAAGGAAAGGTAGAAAACCAATTCTTAAGGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTGGCCATAATGGGTCCTTCTGGCTGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGAAGACTGGTTTCAAGCTCAAAGCAAACCGGGAAAATTCTAATTAATGGCCATAAACATGCACTGGCTTATGGAACATCTGCATATGTAACACATGATGATGCTGTGTTATCAACATTAACAGTAGGAGAAGCAGTATATTATTCAGCTCATCTCCAATTTCCAGACTCAATGTCCAACAGAGAGAAGAAAGAGAGAGCAGACTTTACAATCAGACAAATGGGTCTACAAGAGACCACTGACACAAGGATTAAAGGGAAGGGTTCTAAAGGTCTTAGTGAGGGGCAAAAGAGGAGACTAGCTATTTGTATTCAGATTCTTACAAGCCCCAAACTTCTCCTTCTTGATGAACCAACTAGTGGCCTTGACAGTGCAGCTTCCTACTATGTCATGAGCAGAATTGCTAGCCTAAAGATAAGAGATGACATCGAAAGGACAATTGTTGCATCCATCCATCAGCCTAGTAGTGAAGTTTTTGATCTATTTGATCATCTTTGTCTTCTGTCTTCAGGTGAAACGGTATATTTTGGCACCACTTCTGCAGCAACCGAGTTTTTTGCTTCAAATGGCTTTCCTTGTCCATCTCTCCACAACCCTTCTGATCATTTCTTGAGGATCATAAACAAGGATTTCATACTGGGTGATAAAGAAAGCTTCCACATAATAGTACCCAAAGAAGAAGCAGTAGATATCCTTGTGAAGTTTTATAAATCTTCTGAAATTAGTAACCAAGTTCAGAAAGAAGTGGCAGCGATAGGTGAAAGTGAATATGGTTTCATGGGGAGGAGCAGAACACAAACTGCATTTCTTACTCAGTGTCAGGTTCTTTGGAGACGATCTTCATTGCACTTGTTTCGTGATGTAACCAATTATTGGTTGCGTTTAGCTATGTTTTCTGTAGCAGCTATTAGCATGGGAACTATATTCTTTGACGTTGGTTCAAGTAATTCATCTATACAGGCTAGAGGGGCACTGGTCTCTTTTGTTGCTACAGTCCTAACTTTCATAACCCTTCTTGGTGGATTTCCTCCATTTGTGGAACAAATGAAGGTATTTCGACGTGAAAGATTGAATGGGCATTATGGTGTTGCTGCTTTTGTCATTAGCCACACGTTATCACCCATTCCATATATGGTACTGATGTCACTGATTCCTGGAGTGATTACTTATTACCTTTCGGGACTTCACACAGGACTCGAACGTTGCATCTACTTTTCTAGTGTACTACTTGCATGTATATTGTGGGTTGAGAGCCTCATGATGGTTGTTTCAAGCATCTTCCCAAATCCCAACACTGGCATCACAGTCTGTGGTGGACTTATGGGAGTGATGATTTTAACTGGTGGATTTTTTCGCCTGCCAAATGATCTCCCCAAGCCCTTTTGGAAATACCCTATGTACTATGTTTCCTTCCACAAATATGCCTTCCAAGGATTGTTCAAGAATGAGTTTATTGGTCTGAAGTTGGCTAGTGATCAAGATGGAGGTACCTACATGAGTGACAAGGAAATACTAACAAACACATGGCAGGTGGAAATGGGTCACTCCAAATGGGTTGATCTTGCTATCTTAATGGGGATAATTGTTTTATATAGACTTATGTTCTTGGCCATCATCAAGAGTAAGGAGAAGATGAAAGCTTGA 1962 0.4113 MNFLLNPPIQCNATNYESPISSPTPLIMQSNQEFVATIEEERNTSTKTKVEGIFLTWEDLQVTVPNGRKGRKPILKGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLVSSSKQTGKILINGHKHALAYGTSAYVTHDDAVLSTLTVGEAVYYSAHLQFPDSMSNREKKERADFTIRQMGLQETTDTRIKGKGSKGLSEGQKRRLAICIQILTSPKLLLLDEPTSGLDSAASYYVMSRIASLKIRDDIERTIVASIHQPSSEVFDLFDHLCLLSSGETVYFGTTSAATEFFASNGFPCPSLHNPSDHFLRIINKDFILGDKESFHIIVPKEEAVDILVKFYKSSEISNQVQKEVAAIGESEYGFMGRSRTQTAFLTQCQVLWRRSSLHLFRDVTNYWLRLAMFSVAAISMGTIFFDVGSSNSSIQARGALVSFVATVLTFITLLGGFPPFVEQMKVFRRERLNGHYGVAAFVISHTLSPIPYMVLMSLIPGVITYYLSGLHTGLERCIYFSSVLLACILWVESLMMVVSSIFPNPNTGITVCGGLMGVMILTGGFFRLPNDLPKPFWKYPMYYVSFHKYAFQGLFKNEFIGLKLASDQDGGTYMSDKEILTNTWQVEMGHSKWVDLAILMGIIVLYRLMFLAIIKSKEKMKA* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02858 653 Pfam ABC transporter 75 226 IPR003439 GO:0005524
Lapu3g02858 653 SMART AAA_5 84 278 IPR003593 GO:0016887
Lapu3g02858 653 FunFam ABC transporter G family member 11 53 341 - -
Lapu3g02858 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 43 652 - -
Lapu3g02858 653 Pfam ABC-2 type transporter 377 590 IPR013525 GO:0016020|GO:0140359
Lapu3g02858 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 301 IPR003439 GO:0005524
Lapu3g02858 653 Gene3D - 53 296 IPR027417 -
Lapu3g02858 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 292 IPR027417 -
Lapu3g02858 653 Pfam ABC-2 type transporter 258 314 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02858 Lapu-Chr3 51466997 51470707 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02858 41 284 Calmodulin-binding Proteins AT2G36910 26.923 7.70e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02858 K05681 - gmx:100784793 1152.5