Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02851 ATGGCGGAGCGTGCTTCTTACGGATTGGGACCTCGATTAGATCTTCAGCAATTACAACTTGAAGCCCAGAATAGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTTGCAATTATCGGATGTTTCAAATCACATCAGAACCACCTAACAGGCCACCAAGTGGCTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTACTTTAGAAAAGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGCTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACAGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAAACCAATGTTGGTGGAAAAACATATTCTGGTGAGACTACATCAGATTCCCAGAAGGGCAGTTTGTCATCTGGCTTTCCCAGAAATTATGGTAGCGTGCCTTCAGGAAGTACAGATTCCATGAGCCCAACCAGCACTTTGACGTCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGTTCAGGATTACAGTCCTATCATGAATCAAAAAGTTTGGGGAATGATCGCCCAATGGATAAGATTGATGCTCGTTCAAATAGTTCATATCTTATGCATCCATTTTCAGGTGATCCTGCACAACTTCCAGTTCCTGGAGCAGAATATATCCCACTTGTTCAGGGGCATAAGCCTAGAGCTACTGATACTACTTACACTGAGGGTTATAGAGCACATGACATTGCATCATGGGACAATGCCATGGAGCAGTCTTCTGGAAAGCATACTGATCCTTCTTTTGTATCATCTATATCCATTCCATCAAGTGCATCGGGAAACATCCTTGAAGAAAACAATACTGTTCCAGGCAACATTTTAGGGCATAAAAATGCCCTCATTGAAGAGGAAGGGCCATCTCAGCCTATCCACTCAAATTGGCAGATTCCTTTTGAAGAAAATACTGGAGAATTACCTAAGTGGAGCCTTACCCAATCATTGGGTTTGGAATTTGGATCTGATTATGGCACTAGTTTACTGGGGGATGTAACTGATAATGCAGGCCCAGAAATTGTTCCTGAGATGTTCACTTTTAATGGTGAGTTAAAAGAGAAGTCTGTGCACCAAAACATCTCAAAGCAGTATACAAATACACAATCTCAACCTGCAACGAAATCCAATTCCGAGTATGAAGTGCCTGGTGAAGCAAGTATTAATTATGCCTTGACCATGAAGCGTGGATTTTTGGATGGAGAGGAGAGCTTAAAGAAGGTTGATAGTTTCTCTAGGTGGATTACTAAAGAATTTGCTGGTGTGGATGATCTGCATATGCAGTCCTCCCCTGGTATTTCATGGAGCACAGATGATTGTGGGGATGTGATAGATGATACATCATTAAATCTGTCCCTTTCTCAAGACCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTGAAGAGTCAACCTATGGTGACAGCAAGTAACTGGTCCTGTATGTTCGGGGAAGTCGAGGTTCCTGCTGAGGTTTTAGCAAATGGAATTCTGTGCTGTCGAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTACGTAACATGTTCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTCGAGTACAGGGAAGGTGTCGACAGAAATATAGATTTTACAGAAGTTTTTAACAGTTCAACTGAAGTGGTCCTTCATTTGCGACTGGTAGGGTTACTTTCTTTAAATTCAGTGCACACTTCAAATCAAGTGTTTGAGGGTGATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCACTGAAAGAGGAAGAAGAATATTCAACTAAAGAAGAGACAACTGTGGAGATGGATATAACAAAACACAAGTTGAAGGAGCATATGTTTCACAAGCAGGTTAAAGAGACGTTGTACTCATGGCTTCTTCACAAAGTAACTGAAACTGGTAAAGGACCTCTTGTATTAGGTGAGGAAGGGCAGGGCGTCTTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCTATAAAACCAATCATAACTGCTGGAGTCAATATCAACTTCCGTGATGCGAGTGGATGGACAGCTCTACATTGGGCTGCATTCTGTGGCCGTGAGCGAACAGTTGCGGTCCTTGTGTCGATGGGTGCTGCCACTGTAGTAGTGACAGATCCATGTCCAGAATTTCCTGAAGGTAGAACACCTGCGGATCTTGCTTCTAGCAACGGCCACAAAGGAATTTCCGGTTTTCTTGCAGAGTCATTATTAACTAGTCATCTTGAATCACTCACAATGGAGGAAAATAAAGATGGTAGGAAAGAAACTTCAGGAATGAAGGTAGTGCAAACAGTTTCAGAGCGAACTGCGATACCCGTGCTTTATGGTGATACACCAGATGTTATCTGCCTCAAGGATTCTCTCAATGCTGTCCGGAATGCTACCCAAGCTGCTGATAGAATACATCAAGTATACAGAATGCAGTCATTTCAGAGGAAGCAGGTAGCTCAGTATGATGATGATGAATTTGGATTGTCAGATCAACAAGCTCTTTCCCTTCTAGCTTCTAGGACGAGCAAATCTGGACAGGGAGAGGGTTTAGCCAGTGCTGCTGCAATACAAATACAGAAAAAGTTTCGGGGTTGGAAGAAAAGAAAAGAGTTCTTGATCATTCGAGAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTCAGAAAGCAGTATAAATCTATCATATGGTCCGTGGGAATCCTGGAAAAGGTCATATTACGCTGGAGGCGCAAGGGCAGTGGTTTACGTGGATTTCGACCAGATACCCTGAACAAGGTCGTCCCTGACCAACCAATAGAATCTCTGAAAGAGGATGATTATGATTTTCTGAAGGAAGGAAGAAAACAAAGTGAAGCAAGGTTCCAAAAGGCCCTTTCGCGGGTGAAGTCCATGGTTCAATATCCAGAGGCACGGGCTCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGAGATAATTTGAGTTCGATGAATTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTTTTAGATGATGAAAATTTCTTACCTATAGCTTTCGATTGA 3267 0.4193 MAERASYGLGPRLDLQQLQLEAQNRWLRPAEICEILCNYRMFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEQDMMHIVFVHYLDVKVNKTNVGGKTYSGETTSDSQKGSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLQSYHESKSLGNDRPMDKIDARSNSSYLMHPFSGDPAQLPVPGAEYIPLVQGHKPRATDTTYTEGYRAHDIASWDNAMEQSSGKHTDPSFVSSISIPSSASGNILEENNTVPGNILGHKNALIEEEGPSQPIHSNWQIPFEENTGELPKWSLTQSLGLEFGSDYGTSLLGDVTDNAGPEIVPEMFTFNGELKEKSVHQNISKQYTNTQSQPATKSNSEYEVPGEASINYALTMKRGFLDGEESLKKVDSFSRWITKEFAGVDDLHMQSSPGISWSTDDCGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPMVTASNWSCMFGEVEVPAEVLANGILCCRAPPHKIGRVPFYVTCSNRFACSEVREFEYREGVDRNIDFTEVFNSSTEVVLHLRLVGLLSLNSVHTSNQVFEGDMEKRNLIFKLISLKEEEEYSTKEETTVEMDITKHKLKEHMFHKQVKETLYSWLLHKVTETGKGPLVLGEEGQGVLHLVAALGYDWAIKPIITAGVNINFRDASGWTALHWAAFCGRERTVAVLVSMGAATVVVTDPCPEFPEGRTPADLASSNGHKGISGFLAESLLTSHLESLTMEENKDGRKETSGMKVVQTVSERTAIPVLYGDTPDVICLKDSLNAVRNATQAADRIHQVYRMQSFQRKQVAQYDDDEFGLSDQQALSLLASRTSKSGQGEGLASAAAIQIQKKFRGWKKRKEFLIIRERIVKIQAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDTLNKVVPDQPIESLKEDDYDFLKEGRKQSEARFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGDNLSSMNSEETVDGVEDLIDIDMLLDDENFLPIAFD* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02851 1088 FunFam Calmodulin-binding transcription activator 2 910 958 - -
Lapu3g02851 1088 ProSiteProfiles Ankyrin repeat profile. 703 735 IPR002110 GO:0005515
Lapu3g02851 1088 SMART ANK_2a 703 732 IPR002110 GO:0005515
Lapu3g02851 1088 SMART ANK_2a 775 804 IPR002110 GO:0005515
Lapu3g02851 1088 SMART ANK_2a 736 766 IPR002110 GO:0005515
Lapu3g02851 1088 Pfam IQ calmodulin-binding motif 936 955 IPR000048 GO:0005515
Lapu3g02851 1088 Pfam IQ calmodulin-binding motif 913 931 IPR000048 GO:0005515
Lapu3g02851 1088 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Lapu3g02851 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 912 961 IPR027417 -
Lapu3g02851 1088 ProSiteProfiles IQ motif profile. 934 958 IPR000048 GO:0005515
Lapu3g02851 1088 MobiDBLite consensus disorder prediction 145 186 - -
Lapu3g02851 1088 Pfam IPT/TIG domain 503 588 IPR002909 -
Lapu3g02851 1088 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Lapu3g02851 1088 SMART CG_1_2 18 136 IPR005559 GO:0003677
Lapu3g02851 1088 ProSiteProfiles IQ motif profile. 911 940 IPR000048 GO:0005515
Lapu3g02851 1088 Gene3D - 911 958 - -
Lapu3g02851 1088 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1050 - -
Lapu3g02851 1088 MobiDBLite consensus disorder prediction 199 222 - -
Lapu3g02851 1088 SUPERFAMILY E set domains 503 589 IPR014756 -
Lapu3g02851 1088 ProSiteProfiles Ankyrin repeat region circular profile. 736 761 - -
Lapu3g02851 1088 FunFam Calmodulin-binding transcription activator 2 496 592 - -
Lapu3g02851 1088 Gene3D Immunoglobulins 496 592 IPR013783 -
Lapu3g02851 1088 Gene3D - 649 798 IPR036770 -
Lapu3g02851 1088 ProSiteProfiles Ankyrin repeat profile. 736 768 IPR002110 GO:0005515
Lapu3g02851 1088 SUPERFAMILY Ankyrin repeat 698 797 IPR036770 -
Lapu3g02851 1088 SMART iq_5 933 955 IPR000048 GO:0005515
Lapu3g02851 1088 SMART iq_5 910 932 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02851 Lapu-Chr3 51393782 51404195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02851 1 1069 CAMTA Transcription Factor Family AT5G64220 52.593 0.0 1075
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lapu3g02851 CG-1 3.5e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02851 K21596 - gmx:100795682 1882.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02851 3 51393782 51404195 Lapu6g01069 6 10688502 10700339 PCT