Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02847 ATGGCCAACCCTAAAACCAAGACTCCTCCTTCGCTGGGTGGCGAGGACGATCCTGAATCCTACGAGTCGCGGTGGGTTTTCCAGGAGGATGAGGATCCCTCCGAGATCGAGGACTTCGACGCCGCCGATTTGCGCCAGCAGCCTATGTTCGATTCTGAGGACGAGGACAATGCCGAGCAGAGACTCGTTCGCACCGGTCCGCGAATCGATTCATTTGATGTCGAAGCTCTTGAGGTGCCCGGCGCTCAGAGAAACGACTACGAGGATGTGAGTGTGGGGAAGGGGATTCTGTTGGCTTTTCAAACTCTCGGTGTTGTTTTTGGTGATGTTGGAACGAGTCCTTTGTATACGTTCAGTGTTATGTTCAGGAAGGCTCCTATCAATGGAAATGAAGATATTCTTGGAGCTTTATCCCTTGTTTTGTACACTTTAATCTTGATACCTTTACTGAAGTATGTCCTTGTTGTTCTGTGGGCCAATGATGACGGGGAAGGTGGTACGTTTGCATTGTACTCGTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCGGATGCTCGAATATCGGGCTTTAGACTAAAGGTGCCGTCTCCCGAGCTTGAAAGGTCTTTAAAAATAAAGGAAAGACTAGAGACTTCGCTGACTCTTAAGAAGATTCTGCTATTATTAGTTCTTGCTGGTATTTCCATGGTGATAGCTAATGGGGTGGTTACGCCAGCAATGTCAGTACTATCTTCTGTTAATGGTTTGAAAGTTGGGGTAGATGCAATTAAACAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTGTCGTTTTGTTCAGTGTACAGAAATATGGAACAAGTAAAGTGGGACTTGCTGTAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTGGCGGGCATTGGTATATACAACCTTGTCAAATATGACAGTAGTGTCTTGAGGGCCTTTAATCCTATTCACATATATTATTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGCTCTGAAGCTATGTTTGCAGATCTTTGCTATTTCCCTTTACGGTCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTACTGTTGGGTTATTTGGGTCAAGCTGCATATCTTATGGAAAACCATGCTGATGCTGGCAATGCCTTCTATTCTTCTGTTCCAAGTGGGGCATTCTGGCCAACTTTCCTCATCGCTAACATTGCTGCATTAATTGCAAGTCGTGCTATGACAACTGCCACATTTTCTTGTATAAAACAGTCTGCTGCACTTGGTTGCTTCCCTCGTCTTAAAATAGTTCATACCTCTCGGAAATTTATGGGACAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCTTTGGTGTTTGTCTGTACTATATCCAGCGTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACTCTTGTCATGCTTCTTATATGGCAGATTCATATCATTGTAGTGCTGATTTTTGCAGTAGTCTTCCTGGGACTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATTATATTGGTCTTTGCTGTATTAATGTTTTTTATAATGTTTATATGGAATTATGGGAGCAAGCTCAAGTATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTGATGCGAGAATTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATCGGCTTGCTCTATAATGAGTTGGTGAAAGGAATTCCAGGCATTTTTGGCCATTTTCTAACCACGCTTCCAGCAATACACTCTATGATTATATTTGTGAGTATTAAGTATGTTCCGGTTCCTATGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTATGCCAGAGAAGCTATCATATATTTCGTTGCATTGCCAGATACGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTGTTGATGGAGAGCCTAGAGAAGTTTATACGTCGTGAAGCTCAGGAGAGGTCACTCGAGAGTGATGGGGATGATGATTCTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTTATAGCTCCCAATGGGAGTGTTTATTCACTTGGCGTTCCTCTTCTGGCTGATTTTATTGATACAGACATACCCATACCCAATTTTGAAGCAAGCACATCTGAGGATGCAAACCCTGAATCTCCTAAGCCCCCAGTGTTTGATGCTGAGCAGAGTCTTGAAAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTTGTTTACCTTCTTGGTCATGGGGATATAAGAGCTAGGAAAGACTCATGGTTTATGAAGAAGCTAATTATAAACTATTTTTATTCTTTTCTGAGAAAGAACTGCCGAAGGGGGATCACAAATTTAAGTGTACCTCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTGA 2541 0.4258 MANPKTKTPPSLGGEDDPESYESRWVFQEDEDPSEIEDFDAADLRQQPMFDSEDEDNAEQRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSPELERSLKIKERLETSLTLKKILLLLVLAGISMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLVVLFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCYFPLRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIVHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSVDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLIFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVLMFFIMFIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDEYSGSRVLIAPNGSVYSLGVPLLADFIDTDIPIPNFEASTSEDANPESPKPPVFDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFMKKLIINYFYSFLRKNCRRGITNLSVPHSHLMQVGMTYMV* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02847 846 NCBIfam potassium uptake protein 98 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lapu3g02847 846 MobiDBLite consensus disorder prediction 1 41 - -
Lapu3g02847 846 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lapu3g02847 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 94 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02847 Lapu-Chr3 51339499 51347645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02847 2 846 Inorganic Solute Cotransporters AT5G09400 77.491 0.0 1301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02847 - - gmx:100803841 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02847 3 51339499 51347645 Lapu3g02847 3 51339499 51347645 ECH
Lapu3g02847 3 51339499 51347645 Lapu6g01067 6 10667140 10673140 PCT