Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02835 ATGGCAGTTGCAACATCTGGTGCTGTGTTAAACAGGTTTGGATCTCACTTCTTATGTGGAGGAAAGAGGAGTCAGGCACTGCTTGCTGCTGGCATTGGAACCAAAGTTGGTGCTGCTGGTCCTAAAAGAGTTATTGTAGCAGTTGCTGCTGCTCCAAAGAAGTCATGGATCCCTGCTGTGAAAGGTGGTGGGAATTTCATTGACCCAGAATGGCTTGATGGCTCGCTACCAGGTGACTATGGTTTTGACCCTCTAGGACTAGGAAAAGACCCAGCATTCCTGAAATGGTATAGAGAAGCTGAACTCATTCATGGGAGGTGGGCGATGGCTGCTGTTGTAGGCATCTTTATTGGGCAGGCCTGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGATCCTAATGCAATTGCTCCTTTCTCCTTTGGTTCTCTTTTGGGTACCCAGTTACTTCTAATGGGATGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCAGATTCTCAGTCAGTGGAATGGGCCACCCCATGGTCAAGAACTGCTGAGAACTTTGGCAACTCTACTGGTGATCAAGGCTACCCTGGGGGCAAATTCTTTGATCCCTTGGGATTTGCTGGCACAATTAAGGATGGTGTTTACATTCCGGATGCAGACAAGTTAGAGAGACTGAAATTGGCTGAGATAAAGCATGCTAGGATTGCGATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGACAGGGCAAGACACCCCTTGGTGTTTTTGGCCTGTAA 774 0.4819 MAVATSGAVLNRFGSHFLCGGKRSQALLAAGIGTKVGAAGPKRVIVAVAAAPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFGNSTGDQGYPGGKFFDPLGFAGTIKDGVYIPDADKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGVFGL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02835 257 Gene3D Chlorophyll a/b binding protein domain 69 255 - -
Lapu3g02835 257 Pfam Chlorophyll A-B binding protein 69 245 IPR022796 -
Lapu3g02835 257 FunFam Chlorophyll a-b binding protein, chloroplastic 69 256 - -
Lapu3g02835 257 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 63 252 IPR001344 GO:0009765|GO:0016020
Lapu3g02835 257 SUPERFAMILY Chlorophyll a-b binding protein 66 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02835 Lapu-Chr3 51241848 51243478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02835 1 257 Chloroplast and Mitochondria Gene Families AT1G15820 82.171 9.04e-154 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02835 K08917 - gmx:100783223 503.056