Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02832 ATGTGCAAGCCCTTTCAATCTCACGGCCTTCCTCTTTCTAAACAGCAAAGAGTTTCTAATGTGAAGTTTGGTACTGTTTCATGCAGAGCCACAACCCAAGAAAACTTGTACAAAGTACTGTCTGTGAGTCCTGGAAGTGCAACAATGGACGAGATTAAGAGGGCTTATAGATCCATGGCTCTCCAGTACCACCCTGATGTGTGCCACGATCCCTCCATGAAAGAGGAGTCTACGAGGCTGTTTGTGCAGCTAAACGCAGCTTACAAGACCTTGTCCAATCCAAGGCTTCGAGAACAGTACGACAGTGAATTGGGTCTGAGAAGCAAAGTCATGAATGTTGGTAGTGATCGTGAGAGATGGGGAAGTGTGAGTGTTTGCAGTGATCATGAGAGATGGGGAAGCAAGTTGCAGGAGGAAGTGATTGAGGTGAAGACAAGGTCTCGTAGACGAATGGGACAAAAGGGAGGATCATCGACTACCAGAATGAGAACACAAAACATGAAAGACAGACATTGA 516 0.4612 MCKPFQSHGLPLSKQQRVSNVKFGTVSCRATTQENLYKVLSVSPGSATMDEIKRAYRSMALQYHPDVCHDPSMKEESTRLFVQLNAAYKTLSNPRLREQYDSELGLRSKVMNVGSDRERWGSVSVCSDHERWGSKLQEEVIEVKTRSRRRMGQKGGSSTTRMRTQNMKDRH* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02832 171 FunFam Chaperone protein dnaJ 20, chloroplastic 23 125 - -
Lapu3g02832 171 CDD DnaJ 35 93 IPR001623 -
Lapu3g02832 171 SUPERFAMILY Chaperone J-domain 31 100 IPR036869 -
Lapu3g02832 171 PRINTS DnaJ domain signature 76 96 IPR001623 -
Lapu3g02832 171 PRINTS DnaJ domain signature 56 71 IPR001623 -
Lapu3g02832 171 PRINTS DnaJ domain signature 38 56 IPR001623 -
Lapu3g02832 171 ProSiteProfiles dnaJ domain profile. 35 104 IPR001623 -
Lapu3g02832 171 SMART dnaj_3 34 96 IPR001623 -
Lapu3g02832 171 Gene3D DnaJ domain 22 119 IPR036869 -
Lapu3g02832 171 Pfam DnaJ domain 35 101 IPR001623 -
Lapu3g02832 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 27 169 - -
Lapu3g02832 171 MobiDBLite consensus disorder prediction 145 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02832 Lapu-Chr3 51213979 51219738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02832 37 111 C2H2 Transcription Factor Family AT1G74250 40.260 6.53e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02832 - - gmx:100811478 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02832 3 51213979 51219738 Lapu6g01054 6 10573225 10573722 PCT