Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02823 ATGCATTCATTTGGCATCCTTTTGGTTGTTCTCTACTCTCTGTTGAGCTTTGCATTCTCGGATATCAATTTTGTAAAATATGGGTTTCTGCAATCAGGCTTGAAAATGGAGGGAGCTTATGTGAGGCCGAATGGCATACTCACCTTGACAAATGATTCTGCAAAAATCCTTGGCCATGCATTCTATCCATTTCCTTTGCCATTCAAATCTAGAAAAAACAAATTCATTGTTGCAACCTTTAGCACTAACTTTGTGTTTTCCATTGTTCCTAAGTACCCAGATCTTGGTGGACACGGTTTTGCATTCGTCCTAATATCTACCAACGAACCAAAAGGATGCCTCAGAAATCAATATTTAGGCCTTCCAAATGAGACAAGTAATAAAGAATTCTCAACCCGGTTCCTAGCTGTAGAGTTTGACGGGGTCCAGAACCTTGAACTTGAAGACATCGATGATAATCACGTGGGAATAGATATATCCAGCCTCGTCTCTAACACATCTAAGTCAGCAGCATACTACTTAGAAAGAAATGGCCACAAAGATCACAGCAAGAACATTTCCATCAGTTTGAAGAGTGGAAAACCCATTCAAGCATGGGTTGATTACAATGAAGGGGAGATGATGATGCATGTCACAATTTCTCCTTTTGGCATACCAAAGCCATATTTTCCTTTGATATCATTTCCCATAGACCTATCCTTGGTGTTTAATGACTACATGTATGCAGGTTTTTCTGCTTCCAATGGTCTGCTGATAGCTGAGTATAATATACATGGTTGGAGCTTCAAAATAGGAGCAGCAGCACAAGAGCTAGAAAAATCAGCTGTGCCACTTTTTCGGTCAAGTACTTCTAGAAAGGTGGTGCACAAAAAAGACTTTGAAGTAGGTATTACTTTAGCAAGTACATCTCTTTTTACCTTGACAATTGTAGTAGCTCTTGTCCTGCACAGATTAAGAAATGGAGAGGAGATTTTGGAAGATTGGGAACTCGAATATGCCACCAATAAATTTAAATATTCAGAGCTCCATTCAGCTACAGGAAAGTTTGGGGACAGAAACCTTATTGGGTATGGAGGATTCGGTAAAGTCTATAAAGGAGTAATCCCTAGCACAGGACTAGAAGTAGCCGTAAAGCGGGTTGCTCCTGATTCAAGGCAGGGAATCAGAGAATTTGTAGCAGAAATAACAAGCATGGCACAGCTTAAGCATACAAATTTGGTGCAATTACATGGGTGGTGCAGGAAGCAGGATGAACTTCTCATTGTTTATGACTATCTACCAAATGGAAGCCTAGACAAGCTTCTTTTTGAAAATGATCATCAGAAGAAAAAATTACTAACTTGGGATCAGAGATACAAGATCATTACTGGAGTTGCCCAAGGGCTGCTGTATCTCCATGAAGAAAGTGAGCTGCAGGTTGTTCACAGAGACGTAAAGCCAAGCAATGTCCTGATAGATGCAAATCTCCAACCAAAGCTTGGTGATTTTGGTCTTGCAAGGACTTACGAGCATGGAATCAATCCACAGACAACAAGCGTGGTGGGAACACTAGGGTACATGGCCCCTGAGCTCACGAAGACTGGGAAAGCAAGAACAAGCACTGATGTATATGGGTACGGAGTACTCATCTTGGAAGTAGCATGTGGAAGGAGACCAATAGAGCCCCAAAAGAATCCTGAGGAACTGGTATTGGTAGACTGGGTTAGAGAACTACACCACCAAGGACAGATCAGCAGAGCAATTGACCCCAGTTTAGATGAGTATGACAAAGATGAAGCTCAGCTTGTGCTTAGTCTTGGATTGCTTTGCTCTCATCCCAATCCTGATTACAGACCTAATATGAGAAGGATTGTCCAGTTCCTTCTGGGAGAAACCATCCTTTCTCCACTTCCTCATGACATTCACTGTGAAGGTCCAAGACCAATACCAAAATGTCCGTGCAACTTTCCAGATGATTCCGGACCTTCAAGTTCTATGGTGTCTTCCTCAAACTATTATAGTCTTACATGCTTTGATGATGTGGTCTAA 2028 0.4157 MHSFGILLVVLYSLLSFAFSDINFVKYGFLQSGLKMEGAYVRPNGILTLTNDSAKILGHAFYPFPLPFKSRKNKFIVATFSTNFVFSIVPKYPDLGGHGFAFVLISTNEPKGCLRNQYLGLPNETSNKEFSTRFLAVEFDGVQNLELEDIDDNHVGIDISSLVSNTSKSAAYYLERNGHKDHSKNISISLKSGKPIQAWVDYNEGEMMMHVTISPFGIPKPYFPLISFPIDLSLVFNDYMYAGFSASNGLLIAEYNIHGWSFKIGAAAQELEKSAVPLFRSSTSRKVVHKKDFEVGITLASTSLFTLTIVVALVLHRLRNGEEILEDWELEYATNKFKYSELHSATGKFGDRNLIGYGGFGKVYKGVIPSTGLEVAVKRVAPDSRQGIREFVAEITSMAQLKHTNLVQLHGWCRKQDELLIVYDYLPNGSLDKLLFENDHQKKKLLTWDQRYKIITGVAQGLLYLHEESELQVVHRDVKPSNVLIDANLQPKLGDFGLARTYEHGINPQTTSVVGTLGYMAPELTKTGKARTSTDVYGYGVLILEVACGRRPIEPQKNPEELVLVDWVRELHHQGQISRAIDPSLDEYDKDEAQLVLSLGLLCSHPNPDYRPNMRRIVQFLLGETILSPLPHDIHCEGPRPIPKCPCNFPDDSGPSSSMVSSSNYYSLTCFDDVV* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02823 675 Gene3D Transferase(Phosphotransferase) domain 1 426 626 - -
Lapu3g02823 675 FunFam L-type lectin-domain containing receptor kinase S.4 426 633 - -
Lapu3g02823 675 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Lapu3g02823 675 CDD lectin_legume_LecRK_Arcelin_ConA 17 264 IPR001220 GO:0030246
Lapu3g02823 675 Pfam Legume lectin domain 26 275 IPR001220 GO:0030246
Lapu3g02823 675 FunFam L-type lectin-domain containing receptor kinase S.4 20 270 - -
Lapu3g02823 675 PANTHER - 39 629 - -
Lapu3g02823 675 SMART serkin_6 349 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02823 675 ProSiteProfiles Protein kinase domain profile. 349 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02823 675 Gene3D Phosphorylase Kinase; domain 1 333 425 - -
Lapu3g02823 675 SUPERFAMILY Protein kinase-like (PK-like) 332 649 IPR011009 -
Lapu3g02823 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Lapu3g02823 675 FunFam receptor-like protein kinase FERONIA 317 425 - -
Lapu3g02823 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 267 IPR013320 -
Lapu3g02823 675 Pfam Protein kinase domain 353 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02823 675 Gene3D - 14 283 - -
Lapu3g02823 675 CDD STKc_IRAK 355 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02823 Lapu-Chr3 51121678 51123735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02823 21 621 Receptor kinase-like Gene Family AT3G55550 46.942 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu3g02823 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02823 - - gmx:100801966 1115.52