Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02821 ATGAAGGAGTTATCTCAGAATCAGACTATTGCTGTCCATGGTATTGCAGGTGCTGGGTCAGTGGCTTTAGCCACTGCCTTCACTTACCCACTCGACACTATGAAAGTTCTCATTCAGGTTGGTTCCAGTCCTGGTAAAGAATTTGACGCTGCTCAGGCTTTGACGAGAGTAGTCTCTCTGTCCGGTAATTCAGGTTTGTACAATGGTTTTGGCTGGTTGGCAGTTGGAAGGATTTTTGGTCTGGGAGCACGATTTGGGGTTTACGAAATCCTGACTGCCTTTTATAAAGATGGTCGGGAAAATAATTATTTATTTGCTTCTGAAGCACTTTTGGCTGGTATGGCATCTGGTGCCATTGAGACAATCATAACCTCTCCATTCGAACTCATCAAGCTTCGCATGCAGGTTACCTCTGCTTCATATGTTCCAAGACCCAACTTCGCTCTGGAAACGGGGGCTGGTAAACCTTTAGTTGCAAGATTACTTAATGGCTGTTATCCAGACAAAAGGTCCCTGGACCTGTATACTGGTCTCATCTCCAACCTAACAACCAAAAATACTAACATGACTAGTGCTTTACTAGAGTATCCATGGACAATGACAGGATCTGGGAAGCCACCGTCAGTTTCCTGTGTCAGGAGACCATCTGACATTATATCTTTGGAAGGCTGGAGCACTTTATGGAGAGGTCTTCGTTCTGGAATTGCTCGAGATTCCGTATTTGGGGGCATATTTTTTTCAACCTGGCAATTTCTGCACCAAGCAATGCTAGATTGGAAGGCTGTAGGGATGAATCCTCCACCCAGGTTAAATGAAGAAGTTGGTCCATTGTCTCCTTTCACTGTTAGTCTTACTGCCGGATTCTCGGCTTCAGTTGCTGCTGCTGCTTCCCATGGTTTTGATACTACAAGAAGTAGATCACAATGTAATGTGCTTCCAAAGTACATCTCAATGGAGAGAAAGATTTTGAAATGGAAGCGACAAGGAAACAAGTTTGAAAGAATTACTGGGATCCATCCTTCAGACAGGAGTCTCTTGTTCCACGGTATTGGTTGGCGGATGGCTCGCTCTGGGTTGGCGTCATTCATTATTGTAGGAAGTTATTTATTTGTTGCTGATCAGCTTACTTCTAGTTTGACTTAA 1143 0.4409 MKELSQNQTIAVHGIAGAGSVALATAFTYPLDTMKVLIQVGSSPGKEFDAAQALTRVVSLSGNSGLYNGFGWLAVGRIFGLGARFGVYEILTAFYKDGRENNYLFASEALLAGMASGAIETIITSPFELIKLRMQVTSASYVPRPNFALETGAGKPLVARLLNGCYPDKRSLDLYTGLISNLTTKNTNMTSALLEYPWTMTGSGKPPSVSCVRRPSDIISLEGWSTLWRGLRSGIARDSVFGGIFFSTWQFLHQAMLDWKAVGMNPPPRLNEEVGPLSPFTVSLTAGFSASVAAAASHGFDTTRSRSQCNVLPKYISMERKILKWKRQGNKFERITGIHPSDRSLLFHGIGWRMARSGLASFIIVGSYLFVADQLTSSLT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02821 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 15 371 - -
Lapu3g02821 380 SUPERFAMILY Mitochondrial carrier 9 368 IPR023395 -
Lapu3g02821 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Lapu3g02821 380 Pfam Mitochondrial carrier protein 108 256 IPR018108 -
Lapu3g02821 380 Pfam Mitochondrial carrier protein 9 96 IPR018108 -
Lapu3g02821 380 Gene3D Mitochondrial carrier domain 10 378 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02821 Lapu-Chr3 51102277 51106437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02821 29 258 Antiporters AT1G79900 23.881 1.50e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02821 - - gmx:100813634 653.669