Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02811 ATGCAGAGAGCTCAATGGCTTCGTCCAGCGGTTCTAGGAGCCAATGATGGGCTGGTTTCGGTTGCTTCATTGATGATGGGTGTAGGAGCCGTTAAAAAAGATGCAAAGGCTATGCTACTTGCTGGTTTTGCAGGACTGGTTTCAGGGGCTTGTGGTATGGCGATAGGAGAGTTCGTTGCTGTGTACACTCAGTATGAAGTTGAGGTTTGTCAGATGAAGAGAGATATGAATATGAGCGTAGGAGGGGAAAAAGACTTGGAGATGGAAATGGAGAAAAGAACGTTACCTAATCCACTGCATGCTACTTTGGCATCTGCAGTATCCTTTTCTATAGGAGCATTGATTCCTCTACTTTCAGCAGCTTTCATAGAAAGTTACAAGAAAAGGGTTATTGTGGTTGTGGCAATGGCTAGCTTGGCTCTGGTGGTGTTTGGAAGGGTGGTGGCTCAACTGGGAAAAACTCCAACGATAAATTCTTTAGTAAGGTTCCTTCTTGGAGGATGGATAGCCATTGCCATGACTTTTGGGTTAACCAAATTACTGGGTGCTAGTGCTTTAGAATAA 564 0.445 MQRAQWLRPAVLGANDGLVSVASLMMGVGAVKKDAKAMLLAGFAGLVSGACGMAIGEFVAVYTQYEVEVCQMKRDMNMSVGGEKDLEMEMEKRTLPNPLHATLASAVSFSIGALIPLLSAAFIESYKKRVIVVVAMASLALVVFGRVVAQLGKTPTINSLVRFLLGGWIAIAMTFGLTKLLGASALE* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02811 187 CDD Nodulin-21 5 155 - -
Lapu3g02811 187 Pfam VIT family 7 74 IPR008217 GO:0005384|GO:0030026
Lapu3g02811 187 Pfam VIT family 87 178 IPR008217 GO:0005384|GO:0030026
Lapu3g02811 187 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 2 181 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02811 Lapu-Chr3 51030716 51031395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02811 2 186 Nodulin-like Gene Family AT3G43660 60.000 4.73e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02811 K22736 - gmx:100803012 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02811 3 51030716 51031395 Lapu3g02811 3 51030716 51031395 ECH