Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02810 ATGGTTGGAAGTGTTGATGTTTTAGCTCCTGATGATTTCAATTCCGCGGCGTTTATAACAGATCATGTGCCACTCGTAGCCGGAGAGAATGGCCTTGGCAAGGGAGAGGTTCAGAATGATACAGAAAATGGGGAGAGAAAGATTGTCCTGGGAAGAAATATTCATACCATGTGCCTTGAAATCTCGGAGCCTGATATAGATGATGAGGTTACTGGTGAAAGGGAAGCTTATATGGCAAGTGTGTTGGCTAAATACAAAAAATCTCTGACTGAAAGGACCAAATATCATTTAGGTTACCCCTATAATTTGGATTTTGACTATGAGGCACTCTCTCAACTTCAGCACTTCTCCATCAACAACTTGGGAGATCCATTTATTGAAAGCAATTATGGTGTCCACTCCAGGCAGTTTGAGGTTGGTGTTTTGGACTGGTTTGCTCGGTTGTGGGAATTGGAGAAAGATGAGTACTGGGGCTACATAACAAACTGTGGCACAGAAGGCAATCTCCATGGAATCCTTGTTGGGAGAGAGGTTTTCCCAGATGGGATCTTATATGCCTCACAGGAGTCACATTATTCTGTTTTCAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAGATTGACACTCTTTGTTCTGGTGAGATTGATTGTGATGATTTCAAGGCAAAGCTTCTTTGTCACAAGGACAAGCCAGCAATTGTGAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGACCTTGATCTTGTCATAAAGAAACTTGAGGAAGCAGGATTTTCACATGACAGGTTCTACATTCATTGTGATGGGGCTCTGTTTGGTCTTATGTTACCTTTTGTGAAACGTGCTCCAAAAGTTTCTTTCAAGAAGCCTATAGGGAGTGTGAGTGTTTCTGGGCACAAGTTCGTGGGGTGCAGGAACGGACACGCCCCCATATTCCTCTGGTACAGTCTGAACATGAAAGGGTACAGAGGTTTTCAGAAAGAGGTGCAGAAGTGTTTGCGCAATGCACACTACTTCAAAGGTAGGCTTGTGGATGCAGGCATTGGAGCAATGCTGAACGAGCTGAGCAGCACCGTGGTGTTCGAGAGACCACATGATGAGGGGTTCGTGCACAAGTGGCAGTTGGCATGCCAAGGAAACATTGCTCATGTGGTGGTGATGCCAAATGTCACCATAGAGAAGCTTGATGATTTTCTGAATGAACTCGTGCAGAAGCGTGAAGTGTGGTTCCGTGATGGGAAGTCTCAACCTTATTGTATAGCTTCTGCTGTTGGACACAAAAACTGCCTCTGTGCTATCCATAGATGA 1320 0.4447 MVGSVDVLAPDDFNSAAFITDHVPLVAGENGLGKGEVQNDTENGERKIVLGRNIHTMCLEISEPDIDDEVTGEREAYMASVLAKYKKSLTERTKYHLGYPYNLDFDYEALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASQESHYSVFKAARMYRMECVKIDTLCSGEIDCDDFKAKLLCHKDKPAIVNVNIGTTVKGAVDDLDLVIKKLEEAGFSHDRFYIHCDGALFGLMLPFVKRAPKVSFKKPIGSVSVSGHKFVGCRNGHAPIFLWYSLNMKGYRGFQKEVQKCLRNAHYFKGRLVDAGIGAMLNELSSTVVFERPHDEGFVHKWQLACQGNIAHVVVMPNVTIEKLDDFLNELVQKREVWFRDGKSQPYCIASAVGHKNCLCAIHR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02810 439 Gene3D - 132 319 IPR015421 GO:0003824
Lapu3g02810 439 Pfam Pyridoxal-dependent decarboxylase conserved domain 183 308 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lapu3g02810 439 PANTHER - 38 308 - -
Lapu3g02810 439 Gene3D Aspartate Aminotransferase, domain 1 320 411 IPR015422 GO:0003824
Lapu3g02810 439 SUPERFAMILY PLP-dependent transferases 84 409 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02810 Lapu-Chr3 51019341 51023253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02810 196 305 Calmodulin-binding Proteins AT1G65960 30.435 2.47e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02810 K25193 - gmx:100792053 823.157