Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02808 ATGAAATATCATAGGAAGGTAGTGCAAGAGTTGAAACCTGCGTCGCCGATGGTGCTAGCGCAGGTTGCAACTGCTGCTGTGAATGTGCTTTACAAGTTGGCCATCAACGATGGAATGAGCATTATGGTACTCACTTCCTACCGTCACATTTTCGGAGCTGCTTTCTCTCTTTCTCTTGCTCTTATTTTAGAAAGAAAGAAGAGGCCAAAGCTGACATGGAGAGTGCTTTTGATGTCATTTTTTTGCGGTCTATTTGGAGGGAGTTTAGCGCAAAACCTTTATTTCATTGGTTTGGCTTGGGTATCAGCAACATTTGCTACTTCCCTTTATAATCTCGTTCCTGTGGTTACTTTTATCTTCTCCGTTTTGTGCGGCTTGGAAAAGTTAAGATTGGGAAGCGCTGCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGAATTGTTGGATCAATGCTGCTGACATTTTACAGAGGGGCAGAAATTAAGATTTGGACCTTCCACACTAATCTTTTGCATAAAAATCAAAATGGGCACCTAGGATCATCACATGCTGACTCTGGAAAAAGATGGCTAGGTGTTTTATGTGGTCTTGGAAGTGTTTTAAGTTTTTCATCATGGCTCATCATTCAGACGAAGATGAGTAAAGAATATCCCAGCCATCTCTCAAGTACAGCGTTGATGACCTTAATGGGGGCAATACAAGCCACAGTCTTTGCACTGTGTGTTGAGAAGGATTGGAGCCAATGGAAGTTGGGTTGGAGTATTAGGCTTCTAACTGCAGCTTTTTCGGGAATTGTGGTCTCTGGATTAGTTGTTATTGCCACTGCTTGGTGTGTACGGTTTAAAGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCGCTTGTGATTGTGGCTATTTTTGCTCCCTTGCTGTTGGATGAAAACCTATATCTAGGAAGCGTAATTGGAGCAGTGCTAATTGTGTGTGGGTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATAGAAACATCGTCAGAAAAGACCGAAAATGCAGGTGTTGAAATTTACCACGATGGGTTGTCATCAGAATACTGA 1080 0.4269 MKYHRKVVQELKPASPMVLAQVATAAVNVLYKLAINDGMSIMVLTSYRHIFGAAFSLSLALILERKKRPKLTWRVLLMSFFCGLFGGSLAQNLYFIGLAWVSATFATSLYNLVPVVTFIFSVLCGLEKLRLGSAAGRVKVLGPIIGIVGSMLLTFYRGAEIKIWTFHTNLLHKNQNGHLGSSHADSGKRWLGVLCGLGSVLSFSSWLIIQTKMSKEYPSHLSSTALMTLMGAIQATVFALCVEKDWSQWKLGWSIRLLTAAFSGIVVSGLVVIATAWCVRFKGPLYASVFNPLSLVIVAIFAPLLLDENLYLGSVIGAVLIVCGLYMVLWGKSKEIETSSEKTENAGVEIYHDGLSSEY* 360
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02808 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Lapu3g02808 359 PANTHER WAT1-RELATED PROTEIN 13 339 IPR030184 GO:0016020|GO:0022857
Lapu3g02808 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Lapu3g02808 359 Pfam EamA-like transporter family 17 140 IPR000620 GO:0016020
Lapu3g02808 359 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu3g02808 Lapu-Chr3 51001364 51003341 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02808 11 345 Nodulin-like Gene Family AT1G25270 42.687 5.37e-93 280
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02808 - - var:108326689 608.216