Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02805 ATGGCGTCGTCGAAGGTTGTTTCCACCAATCCGGATCTGCCACGCGACTCTTCTATATCTCCCCTTTCCTCTCTTCTTCTCTCCGATCTGCACCATCCTACCTCCATGGATGACCTCCTCAAGTCCATCACCCCTGCCGCCGCCAAGACCGTCGATGACGTCTGGAAGGAGATAGTCGCTGGCGCCCACCCCCATCACCCCGCCGCCTCTGCAGACGACAATGGTGCCAACGTCAACCCCACCGCCGCTGAGAGTTACGAGACCATTACCCTTGAGGATTTCCTCACCAAGGCTGGCGCCGTCAGAGAGGAGGACGTGAGAGGGGTTCTGCCCCCTTCTTCTTCTTCCTCTCTCCCCTTCCCTCTCCCTCTCCCCGCCGAAGGCTCCTCCTCCTCCGTTGAGCCCTTTGGAAACGGCGTTGCGCCCTCCAATTCGGTTCACAAAGGGAAGAGAAGGGTCGTCGAGGAACCGGTTGATAAGGCCACGCTTCAGAAGCAGAGGAGGATGATCAAGAATCGAGAGTCCGCCGCTAGGTCCCGGGAACGCAAGCAGGCTTACACCTCGGAGCTCGAGTATCTGGTTCACCAGTTGGAGCAAGAGAATGCTCGGTTGGTTAATGAAGAGGCTGAGATGAGAAGGCAGAGGAAAAAGCAGCTCATGGAGTACATCATTCCAGTTGAAGTGATGCCTAAACCCAAAAAAAAACTCAGGAGAGTAAATTCAACTCAATCATTGTGA 738 0.5542 MASSKVVSTNPDLPRDSSISPLSSLLLSDLHHPTSMDDLLKSITPAAAKTVDDVWKEIVAGAHPHHPAASADDNGANVNPTAAESYETITLEDFLTKAGAVREEDVRGVLPPSSSSSLPFPLPLPAEGSSSSVEPFGNGVAPSNSVHKGKRRVVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLVNEEAEMRRQRKKQLMEYIIPVEVMPKPKKKLRRVNSTQSL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02805 245 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 214 IPR004827 GO:0003700|GO:0006355
Lapu3g02805 245 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 167 182 IPR004827 GO:0003700|GO:0006355
Lapu3g02805 245 MobiDBLite consensus disorder prediction 1 20 - -
Lapu3g02805 245 MobiDBLite consensus disorder prediction 107 131 - -
Lapu3g02805 245 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 239 IPR043452 GO:0003700|GO:0045893
Lapu3g02805 245 SUPERFAMILY Leucine zipper domain 164 215 IPR046347 GO:0003700|GO:0006355
Lapu3g02805 245 Coils Coil 187 217 - -
Lapu3g02805 245 Gene3D - 163 219 - -
Lapu3g02805 245 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Lapu3g02805 245 CDD bZIP_plant_BZIP46 164 204 - -
Lapu3g02805 245 Pfam bZIP transcription factor 161 218 IPR004827 GO:0003700|GO:0006355
Lapu3g02805 245 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 163 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02805 Lapu-Chr3 50979746 50982905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02805 49 243 bZIP Transcription Factor Family AT5G44080 41.509 5.38e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu3g02805 bZIP_1 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02805 K14432 - gmx:100101890 270.011