Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02798 ATGGACTGGAGGCGTCGGACCAAGAAGCAATCTCAGGCTCGGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGCCTCGGTTGGAGCGTCTCAACGCCAAAAAGGGCTTCAATTACCAACCACCACCATCTCCACCCTCTCCTTCTTCCACCTCCTCTTCCTCCCATTTCGATCGCCAAACCAGCTTCCGCCTCTTCGGCATCGACGGCGAGTTCGACCGCATCTTCAAGACCTTGGGCCTCTCCGGCCCGGAAGACTTTTCCATCCCCGCCGCTGACTGGGAAGCCTGCAAGGCCCGTGCCGCTACCTCCAACACCCGCGGGCCCACACCTGCCCCTCACGCGCTTCTCCACACTTCTCCCGAGATCCACCCTCTTCCCGTCACCGCTACTGCTGCGCCTCCCCTCCAAGACGACGCCGTTTCGGTTCCCGTTTCCGTTCTGGGTTCCTCCCCTTGGTCCTCCGGGGAGCATGACGCGGGTAGGGGTAGTGTCGGCAGATTGAGAATCGGAGAAAGGAGCGTGCTTTTCACCGATTCCGGTTCCTTCACCACTTCTCACGATGATGACAGTGACATTGGCGGCGAGAGGGTTTCTTTGGTTTCTAATTCCGCCGCACCTGATGATCTGGTTGTGCCTTTTGTCTCCTCCTGGCAAAAAGGTGACATCTTAGGAAATGGGTCTTTCGGAACCGTATACGAAGGCTTCACTGATGAGGGATTCTTTTTCGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTAGTCAGGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTATGGCTTGTACAAGGACAAAAGTAAACTATATATCTTCCTTGAGCTTATGTCAAAAGGGTCATTAGCAAGTCTCTATCAGAAGTATCTCTTAAATGATTCTCAGGTTTCTGCATACACAAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGATCATAATGTGGTCCACAGGGACATCAAGTGTGCTAATATACTGGTTGATGTAAGTGGGGCAGTCAAGCTTGCAGATTTTGGGTTGGCCAAGGCAACAAAATTCAATGATGTTAGATCAAGTAAAGGCTCCCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAAGAACCAAGGTGGTTATGGGTTAGCAGCTGATATATGGAGCTTGGGGTGTACAGTTTTGGAGATGTTGACACGCCAACCTCCTTATTCTGATTTAGAAGGAATGCAAGCACTATTTCGGATTGGCAAGGGTGAACCTCCACCTATTCCGGACTATTTATCTAAGGATGCCCGAGATTTCATTTTTGAATGCTTAAAAGTTAACCCAAATGAACGTCCAACTGCAGCTCGGCTAATGGAGCATCCATTTCTAAGGAGAACATTATCGTCTTCCTTAAGTTTTGCTTCTCCAGGAAGGAATATGTATCGGTCATAA 1482 0.4939 MDWRRRTKKQSQARAQAQAQAQAQAQPRLERLNAKKGFNYQPPPSPPSPSSTSSSSHFDRQTSFRLFGIDGEFDRIFKTLGLSGPEDFSIPAADWEACKARAATSNTRGPTPAPHALLHTSPEIHPLPVTATAAPPLQDDAVSVPVSVLGSSPWSSGEHDAGRGSVGRLRIGERSVLFTDSGSFTTSHDDDSDIGGERVSLVSNSAAPDDLVVPFVSSWQKGDILGNGSFGTVYEGFTDEGFFFAVKEVSLLDEGSQGKQSIFQLQQEISLLSKFEHKNIVRYYGLYKDKSKLYIFLELMSKGSLASLYQKYLLNDSQVSAYTRQILCGLKYLHDHNVVHRDIKCANILVDVSGAVKLADFGLAKATKFNDVRSSKGSPYWMAPEVVNLKNQGGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGKGEPPPIPDYLSKDARDFIFECLKVNPNERPTAARLMEHPFLRRTLSSSLSFASPGRNMYRS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02798 493 Pfam Protein kinase domain 220 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02798 493 ProSitePatterns Protein kinases ATP-binding region signature. 225 247 IPR017441 GO:0005524
Lapu3g02798 493 SUPERFAMILY Protein kinase-like (PK-like) 216 481 IPR011009 -
Lapu3g02798 493 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 23 480 - -
Lapu3g02798 493 MobiDBLite consensus disorder prediction 1 59 - -
Lapu3g02798 493 SMART serkin_6 219 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02798 493 Gene3D Transferase(Phosphotransferase) domain 1 217 490 - -
Lapu3g02798 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Lapu3g02798 493 ProSiteProfiles Protein kinase domain profile. 219 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02798 493 FunFam Mitogen-activated protein kinase 1, putative, expressed 217 486 - -
Lapu3g02798 493 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02798 Lapu-Chr3 50885972 50891281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02798 171 477 MAP Kinase Kinase Kinase AT4G08500 62.620 6.03e-130 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu3g02798 Pkinase 3.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02798 - K13414 gmx:100820552 706.827