Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02791 ATGGCTACCATTTCTTCAACTTCCTCCCTGTTTCTTCCCATAATTTTATTGTTATTCCGCACAACACTGTGTGCAACAGTGGTAGAAGACCTCAAAAACTTACATCAACCCCCGGGCTTTAACTCTACAATTCTGTCCAACTGTATCAAGAATCCATCTCTTAGGTACTGCAGTTCGTCTCCAATGATGGACTTTGATGAAATATTCAAGTTTACTATTGTTGCAAGCCATCTCTGCAATGAATCTAAGAACCCCAATTGTGTAGAGTCATTCCCCAAAGTTGATCTTAGAAACCGCCCAAATATTGCACTACTTTATTTGTCCTTTGATTTCTTTTGGAAGTATTGCCCCTTGAGCATTATGTCAATTGATTTGTCCAACAATTCTATGAAGGGTGGTTTTCCAACTGATGTTTTCTATTGCACCCAAATCCAGTCTCTTGATCTAAGTATCAATGCATTTTCTGGTGACATTCCGATTCAAAGTTTCTCTCCCTTGACCAACCTCACTTTTCTCAACCTCTCGTATAATTATTTTTCAGAGAGTAAACTGTCAGATTCCCAATTCTTCAAAAGGTTTAATTCTTCAAGTTTTCTTCATTCTGGTGCTCTCTTGGATAAAAAAAGGTTTACTGTGAAGGCTGTTGTTCTATTGCTTTGCTTTCCCATCTTTGTCATTTTTATGGTAATTTGCTTGGTATGGCTTTGTTTCCAAAGGCCTGATTTTCTGCCAAGTAAACTTCAAATAGGTAGGAGGTTTACACCAGCAATTCTAAAGGCAGCAACTGATGGTTTTTCAAATAAGTATTTGGTGGGGATGAGTGATGTTGTTCACATCTACAGAGGGATCTTGAGAGATGGTACTGAAGTGAAAATTGAGATGTACTGGGATGATATACCAAGGGATAGTTACCGTAAATTTGTTGAGGAATGCAAGCTTCTGTCTAAGTTACACCACAGAAACCTTGTCAGAGTTCTGGGGTGGTGTAAGAGCAGAAAATTCAGGGCCATTATAACAGAATGGACAAGAGAAGAAAATGTTGAAATGTGGTTATCGGGGGCAGGTTCACCATGGAATCACAGATTGAAAGTGTTAATGGGGGTTGTAGAATGCATGCGTTATATGCAGAAGGAATGGCCTGAAATTGACTATGAACTCGACACAAGTAGTATTTTGTTGTCCGACAATATGGAACCATTAATTTCAAGGTTCAAAGTTGGAGATCACAACAGCAATCAAAGAAAGATACATAGGTTTGGCGTATTTGTGCTAGAGATGATACTAAATAAGAAGGTTAAAGATGCGTTTGATGGAAGTGATGCTGGATTTATTAGGCACATGAGAACCCTTAATCTTGCAGATTTGCAGCAGATGATTGATGAGAGAATGGAAGTTACTGAAGCAAATTTTCATCAAGTTAAGCGGACACTGTCTCTAGGATTAATGTGCATAGATCAATCAAACAGTGAGAAGCCAGACTTAGCTCTGATACTTAACACTGTAGCAAGAGCCTACAAAGCTAGCCTTGTTTTGCCATCTGCAAACCATAGAATTAAGGGACACTTTATTCAGAAATAA 1578 0.3853 MATISSTSSLFLPIILLLFRTTLCATVVEDLKNLHQPPGFNSTILSNCIKNPSLRYCSSSPMMDFDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIALLYLSFDFFWKYCPLSIMSIDLSNNSMKGGFPTDVFYCTQIQSLDLSINAFSGDIPIQSFSPLTNLTFLNLSYNYFSESKLSDSQFFKRFNSSSFLHSGALLDKKRFTVKAVVLLLCFPIFVIFMVICLVWLCFQRPDFLPSKLQIGRRFTPAILKAATDGFSNKYLVGMSDVVHIYRGILRDGTEVKIEMYWDDIPRDSYRKFVEECKLLSKLHHRNLVRVLGWCKSRKFRAIITEWTREENVEMWLSGAGSPWNHRLKVLMGVVECMRYMQKEWPEIDYELDTSSILLSDNMEPLISRFKVGDHNSNQRKIHRFGVFVLEMILNKKVKDAFDGSDAGFIRHMRTLNLADLQQMIDERMEVTEANFHQVKRTLSLGLMCIDQSNSEKPDLALILNTVARAYKASLVLPSANHRIKGHFIQK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02791 525 SUPERFAMILY Protein kinase-like (PK-like) 243 501 IPR011009 -
Lapu3g02791 525 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 98 192 - -
Lapu3g02791 525 Gene3D Ribonuclease Inhibitor 50 209 IPR032675 -
Lapu3g02791 525 SUPERFAMILY L domain-like 83 188 - -
Lapu3g02791 525 Gene3D Phosphorylase Kinase; domain 1 242 341 - -
Lapu3g02791 525 ProSiteProfiles Protein kinase domain profile. 265 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02791 525 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Lapu3g02791 525 Pfam Protein tyrosine and serine/threonine kinase 278 404 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02791 Lapu-Chr3 50798505 50800201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02791 112 498 Receptor kinase-like Gene Family AT1G51890 22.697 1.73e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu3g02791 PK_Tyr_Ser-Thr 1.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02791 - - gmx:100779045 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02791 3 50798505 50800201 Lapu3g02791 3 50798505 50800201 ECH