Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02790 ATGGCATCAAATTCTGGAAACATGAAAGGCTTTTACAGAGAGAAGAAGCCCACAGCCGCAAAGAAATCTCCCAAAGACGCCGCCACTTTGGGCTCCACTGCAGCGCAAACACCGGCCCTCGTCTCCGACGGTGGAAAACCCGACCTCAAAGATGAGTACGATGAGAATGAGACGCTGTTGAGGCAATTCGACCTGAATATGGCGTATGGGCCTTGCATCGGGATACCGCGGCTGGCACGGTGGGAACGAGCTCAGAGGCTCGGTTTGAACCCTCCGCCGGAAATCGAGAGCCTCTTGAAGAGTGGAAAAGTTCAGACGGAGTCCTTGTGGAGTGGTCGCATTTAG 345 0.542 MASNSGNMKGFYREKKPTAAKKSPKDAATLGSTAAQTPALVSDGGKPDLKDEYDENETLLRQFDLNMAYGPCIGIPRLARWERAQRLGLNPPPEIESLLKSGKVQTESLWSGRI* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02790 114 Pfam DNA polymerase delta, subunit 4 51 104 IPR007218 GO:0000731|GO:0006260
Lapu3g02790 114 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 112 IPR007218 GO:0000731|GO:0006260
Lapu3g02790 114 MobiDBLite consensus disorder prediction 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02790 Lapu-Chr3 50794988 50795411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02790 1 114 Core DNA Replication Machinery Family AT1G09815 51.200 1.84e-42 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02790 K03505 - gmx:100778329 171.785