Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02766 ATGAACCACGGAATGGAAGACTATATTTTTGCTCAACATATGAATCTCGATGGCTATAACTTGGGATTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTACAAAGCCATCTATTCGAAAATATACTGAGTGAGCCTGGTTTCTGGGAAAGTCCAGTGCAAGCTATTAAGAAAGCATGCAAAGCAACAGATGATGAGATTTTAGAAAACATAGCTGATTCACGTGGAGGATCAACAGCTGTTGCAGCAATACTAATCAATGGAGTAAAGCTACTGGTAGCCAATGTTGGTGATTCTCGAGCAATATCATGCAAAAATGGTCGAGCAAAACCACTTACCGCGGATCATGATCCAGAGAAGGAAAAAGCTCTAATTGAGAGCAGAGGGGGTTTTGTGTCGAAGAGACCCGGGAATGTTCCAAGAGTGGATGGCCAATTAGCAATGACACGGGCATTTGGAGATGGAAAACTGAAGGAGCACATTACGGCAGAACCAGATGTGACCATTCGGAAGATTGATGAAGACACTGAATTCATTATTTTGGCCAGTGATGGTCTGTGGAAGGCTTGTGACTGTATCAAGAATGTGGATGGTGCGCAGAAAGCATCCAAGAAGTTAGTTAAAGAAGCTAAATCTCTGGGAAGCTATGATGATATTTCATGCATAGTGATTATGTTCTAG 696 0.4167 MNHGMEDYIFAQHMNLDGYNLGLYAIFDGHSGHEVAKYLQSHLFENILSEPGFWESPVQAIKKACKATDDEILENIADSRGGSTAVAAILINGVKLLVANVGDSRAISCKNGRAKPLTADHDPEKEKALIESRGGFVSKRPGNVPRVDGQLAMTRAFGDGKLKEHITAEPDVTIRKIDEDTEFIILASDGLWKACDCIKNVDGAQKASKKLVKEAKSLGSYDDISCIVIMF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02766 231 FunFam Probable protein phosphatase 2C 39 1 231 - -
Lapu3g02766 231 CDD PP2Cc 1 229 IPR001932 -
Lapu3g02766 231 SUPERFAMILY PP2C-like 3 231 IPR036457 -
Lapu3g02766 231 SMART PP2C_4 3 229 IPR001932 -
Lapu3g02766 231 Pfam Protein phosphatase 2C 18 223 IPR001932 -
Lapu3g02766 231 Gene3D - 1 231 IPR036457 -
Lapu3g02766 231 ProSiteProfiles PPM-type phosphatase domain profile. 1 231 IPR001932 -
Lapu3g02766 231 PANTHER PROTEIN PHOSPHATASE 5 229 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02766 Lapu-Chr3 50458414 50461041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02766 3 231 PP2C-type Phosphatase Gene Family AT3G15260 58.898 1.30e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02766 - - gmx:100814772 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02766 3 50458414 50461041 Lapu3g02766 3 50458414 50461041 ECH