Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02759 ATGGAAAAGGAGCCTCTGCTCCCGTATTTCAGCCCCAGAAAGAAGCCTCAATCATTGTCACCACTATGTCCCTTGCCAGAGCACGACGAAATGGTTCTTCCAATGACCCCTATGGAATTCAAGGACCGTCTCATCTTTGGTCCTGCTTGTGCTTCCCCAAGGGACCCTTCACCTTTGGGTGATTCCTTAACACTCCACCTCAATTCCCCCAAATGTTCCTCTTCTACCTCGCAGGACTATGCATCGCCATCACTGTTTGATTCCCCGCACCAACAACTATCCTCTTGGCTCCTTGACCCCAATTACTCCTGGCGGAAAACAAACCTTCATCGCTCCAAAACCGCGCCGGCCATGGCGGTGATCAGCGATTTCAACCACCAACCCTCTGTGCCAAGGCCGCAATTTGGCAGCCAAAGTATCGTGCGCCAGGGTGTGATTCTTCTTGTTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCTACTGAGACTCATCCTATAGTTGATGCATTATATTTTTGTATAGTCACAATGTGTACAATAGGATATGGTGACATCACTCCGAATAGTACAACCACTAAGCTTTTCTCTATATTGTTTGTGCTAGTGGGGTTTGGATTTATAGACATTTTGCTAAGCGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGAGGGCAGTGAAGGGGAGGAGGGGTGAGAAGGATGGGAAGTCCTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGATTGAAGGTGGCGCTGGCGTTGGGAGTTGTGGTGATTTGTATTGGGGTAGGCGTGGCGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGACTCTTTTTATCTTTCAGTTATGTCGGTTACTACGGTTGGCTATGGAGACCATGCATTCAAGACCTTGCATGGCCGGATCTTTGCTGCAATTTGGTTGCTCGTGTCAACGCTTGCGGTGGCTCGAGCGTTCCTCTATTTGGCTGAGGCAAGAGTGGATAAGCGGCATAGGAGGATGGCGAAGTGGATTCTAGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATAGACAACAATGGCTTTGTGAGATCTACTCTGCATCTAATCTACTCTCCTCATCGGAGCTTTTTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCGGAGAAGGACATCATGCAGGTTAGTGAGAAGTTTGATAGACTAG 1263 0.4632 MEKEPLLPYFSPRKKPQSLSPLCPLPEHDEMVLPMTPMEFKDRLIFGPACASPRDPSPLGDSLTLHLNSPKCSSSTSQDYASPSLFDSPHQQLSSWLLDPNYSWRKTNLHRSKTAPAMAVISDFNHQPSVPRPQFGSQSIVRQGVILLVLYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTTTKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLRAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVAVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVRSTLHLIYSPHRSFLNQNMLYTSSRRWEKYRRRTSCRLVRSLID* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02759 420 FunFam Two-pore potassium channel 3 248 362 - -
Lapu3g02759 420 PRINTS Two pore domain K+ channel signature 303 312 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lapu3g02759 420 PRINTS Two pore domain K+ channel signature 183 211 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lapu3g02759 420 Pfam Ion channel 146 226 IPR013099 -
Lapu3g02759 420 Pfam Ion channel 271 340 IPR013099 -
Lapu3g02759 420 SUPERFAMILY Voltage-gated potassium channels 255 359 - -
Lapu3g02759 420 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 145 372 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lapu3g02759 420 Gene3D - 139 235 - -
Lapu3g02759 420 SUPERFAMILY Voltage-gated potassium channels 139 226 - -
Lapu3g02759 420 MobiDBLite consensus disorder prediction 1 23 - -
Lapu3g02759 420 Gene3D - 236 364 - -
Lapu3g02759 420 FunFam Two-pore potassium channel 5 129 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02759 Lapu-Chr3 50387204 50394615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02759 4 384 Ion Channels AT4G18160 63.427 1.94e-160 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02759 K05389 - gmx:100804249 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02759 3 50387204 50394615 Lapu3g02759 3 50387204 50394615 ECH