Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02758 ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCAGCAGGGCACAGGAGGAGGATCTGACATGTATGAAAAGCACTTTTCCTCTTCCTTAATCCCTGCAGGTTCAACACCATATGATTCGCAGCCCTTTGATCCCTCCTACATGAGCTTCACTGATTGTTTGCAAGGGGGCATGGACTACAATTCTCTTGCAACTTCTTTTGGCCTTTCTCCTTCCTCATCAGAGGTTTTCTCATCTGTTGAAGGAAACCACAAGCCTGCAGAAGGAGGAGACGGAGGTGGTGGTAGTGGTGGCAGTGAAACCCTTGCGACCCTTAACTCATCTATCTCTTCTTCATCTTCTGAAGCCGGGGCTGAAGAAGATTCAGGAAAGAGCAAAAAGGATAGACAGGTGAAAACAGAAGAAGGAGGAGGTGGAGAAATCTCTAAGAAAGGGAACAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCTTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCCTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTCGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCATCATCAGCATCACCACCACCCTCACCATCACTTTCACAACACCCTCTTCTCCACACAATCAACAAACGCTGTTACTACTACCACCACTACTGTTAGTACTGGTGCTACTCCTCCCTCCATTTACTCTTCCTATAATATTAACAACTCTCTTCTTCACAACCAGTATCTTCCTCCTGAATATGGTCTCCTTCAAGACATAGTCCCTTCCATGTTCCACAACAAGACACACCACCAGAATTAA 1074 0.4683 MSVEPKELYYQDLVLDHNNQQGTGGGSDMYEKHFSSSLIPAGSTPYDSQPFDPSYMSFTDCLQGGMDYNSLATSFGLSPSSSEVFSSVEGNHKPAEGGDGGGGSGGSETLATLNSSISSSSSEAGAEEDSGKSKKDRQVKTEEGGGGEISKKGNKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSLLATPTPLAAGSNFPQDLFLHMHHQHHHHPHHHFHNTLFSTQSTNAVTTTTTTVSTGATPPSIYSSYNINNSLLHNQYLPPEYGLLQDIVPSMFHNKTHHQN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02758 357 MobiDBLite consensus disorder prediction 79 169 - -
Lapu3g02758 357 Pfam WRKY DNA -binding domain 181 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02758 357 SUPERFAMILY WRKY DNA-binding domain 172 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g02758 357 SMART WRKY_cls 180 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02758 357 MobiDBLite consensus disorder prediction 107 126 - -
Lapu3g02758 357 Gene3D WRKY domain 157 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g02758 357 ProSiteProfiles WRKY domain profile. 175 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g02758 357 MobiDBLite consensus disorder prediction 127 169 - -
Lapu3g02758 357 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 283 IPR044810 GO:0003700
Lapu3g02758 357 FunFam WRKY transcription factor 57 166 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02758 Lapu-Chr3 50361523 50363895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02758 51 349 WRKY Transcription Factor Family AT4G18170 49.671 1.96e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g02758 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02758 - - gmx:100787050 495.738