Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02751 ATGGCTGCTGCATCCTCCATGGCACTCTCATCTCCCTCCCTGGCTGGCAAGGCCGTGAAGCTTGCCCCATCAGCCCCCGAAGTCGGGAGGGTCAGCATGAGGAAGACCGTCACCAAGCAGGCTTCCTCCGGAAGCCCGTGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCGTCCTACCTCACCGGCGAGTTCCCAGGCGACTACGGTTGGGACACTGCTGGGCTTTCCGCTGACCCAGAAACCTTCGCCAGGAACCGTGAGCTGGAAGTCATCCACTCCAGGTGGGCCATGCTGGGAGCCTTGGGCTGCGTCTTCCCCGAACTCTTGTCCCGCAACGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAAGCTGGATCCCAGATCTTCAGCGAGGGTGGACTCGACTACTTGGGCAACCCAAGCCTCATCCACGCTCAGAGCATCCTCGCCATCTGGGCCACCCAAGTTATCCTCATGGGCGCCGTCGAGGGTTACCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACTGACCCCATTTACCCCGGTGGCAGCTTCGACCCATTGGGCCTTGCTGACGACCCAGAGGCTTTCGCTGAGCTCAAGGTGAAGGAACTCAAGAACGGTAGGTTGGCCATGTTCTCCATGTTCGGATTCTTCGTCCAGGCCATTGTCACCGGAAAGGGCCCCTTGGAGAACCTGGCTGACCACCTTGCTGACCCAGTCAACAACAACGCCTGGGCCTACGCCACCAACTTCGTCCCCGGAAAGTGA 792 0.6111 MAAASSMALSSPSLAGKAVKLAPSAPEVGRVSMRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02751 263 Gene3D Chlorophyll a/b binding protein domain 54 256 - -
Lapu3g02751 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 263 IPR001344 GO:0009765|GO:0016020
Lapu3g02751 263 FunFam Chlorophyll a-b binding protein, chloroplastic 54 256 - -
Lapu3g02751 263 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Lapu3g02751 263 SUPERFAMILY Chlorophyll a-b binding protein 46 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02751 Lapu-Chr3 50298768 50301274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02751 3 263 Chloroplast and Mitochondria Gene Families AT1G29930 89.098 9.66e-173 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02751 K08912 - gmx:547862 530.406