Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02742 ATGCAGACTCAGGAATACTTTCTCCCGGAGAAGATGGTACTTCCTTTGCCAGATGAGTCCATTGATGCTAATGCTCATATGCATGCTCCACTTGCTTCTACCTTTAATGCGTTTTTACCCCCAGGTGTGGGGCAGATGACACCCTTTGAAAGATTTAAATTGCAACCCTCTGAGGCTTGCCCCAAGAATTTTGTTATTTTTGATCAAACAGATCAGCGAAGTAGGATTATGTTCCATCCTGCAATGACCTACAAATTTAATAGTCCTGACTTAAATGTTCGTGCTACTTGTTCTCAAGATTTTGAGAAGAATAAAGTCAATCAAGTGGAAAGGGAATTGTCATCTCCTTTTGAAGAAGATCCTAATGACATCGATGCATTGTTGAGTATAGGAGGTGATGAACTAGAAGACTTTGATGAGGAAGAAGTCAGCACGGCGAGGACTCACGAAAATTATGAAGGTTTATCTGATACTTGCTCCAGTTATTGCTCAAAATCAAGGAAGAAGAGGCTGACATCATCTTCTGTACACAAGTCTTCTGAGGGTAGGCACAATGATGGGAATAACCTGGAGATAAAGAGGATGGTGAGGATATTGAGAAAGATCGTGCCTGGTGGAGGTAATCAAATGGATTCTGTTACTGTTTTAGATGAAGCTGTTAAATACCTCAAGTCTCTCAAAGTTGAGGTGGAACAATTTGGAGTTGAACCATGA 714 0.4076 MQTQEYFLPEKMVLPLPDESIDANAHMHAPLASTFNAFLPPGVGQMTPFERFKLQPSEACPKNFVIFDQTDQRSRIMFHPAMTYKFNSPDLNVRATCSQDFEKNKVNQVERELSSPFEEDPNDIDALLSIGGDELEDFDEEEVSTARTHENYEGLSDTCSSYCSKSRKKRLTSSSVHKSSEGRHNDGNNLEIKRMVRILRKIVPGGGNQMDSVTVLDEAVKYLKSLKVEVEQFGVEP* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02742 237 PANTHER TRANSCRIPTION FACTOR BHLH145 28 236 IPR037546 -
Lapu3g02742 237 Gene3D - 167 234 IPR036638 GO:0046983
Lapu3g02742 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 192 233 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02742 18 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 41.423 5.66e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02742 - - vra:106768906 416.001