Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02694 ATGAGTGAAACTTTGAAGACTGTAGCTTGCGCACCATGTGGGGGTCGAGTCATGGGACCAGAAGAGCGAGAACTTTATTTGCAAATCTTGAAGGTAGAAAATATTCTATTAATCAAAGAGTGTGAAAGAGTAGTCTCCTTTATGGCAAACAATGGGATTAATCCAGCACTACTTCCTGCCATTCCTTCTTCTTCTTCATCTTCACTTGATACCTTACGAGCAAGTTTGCTAAATCAAACGGTTGGAACTTCACGAAATCAACTCATTCCAAATCCTGATCTATATATTCCTTCTCCTGCTCACCATAATATTCCAGCAGTTCATCAAGATATTCCCACTGCTACACCAACCCTCTCTCAGGATATTCCTATTCTTACTCATGCCCATAATCAAGAAATTCCTGCTCCTGCACTTGATCAACATGTTTCGACTCTTACTGCTACTTCTCCTGCCACAGTTGATCCCTTTCTCAGTCAAGATGATTCTCTTTTGATTTCTTGTCTCGAATACAATATTCCAGCTTTGGTCACTGCTCTTGATCAAACTATTCCCACACTGGCTTCTACTCATAATCAAAATAACAACGTTCCCGTTGCTGAGAAACAAAGTGAAGGACCTAATCCATGTGTAAACACTCCTTCTGTTTCTCCCACCCCAGATCAAGATATTCCACCTCCCGGTCAAGACATTTCGTCTGTTCTTCAGGATCATACGCCATCTCTTGATCTTGATCTGGATGCGATACTTAAAATTTTGAACAGCGATATGGTATCCCAATCGGCGACCACCGAAAATCAAGATACGGAAAATGAACGAATGCTGAAGATTGCAAATAGTGCAATGGAAGAGTTGATGAAACTCTTAAGTATGAATGAACCCTTCTGGTTCAGGTCTCTTGTGGATGAGAAGTTCATTCTTCAGCGTGATTGCTACCAAAGGATTTTTCGTCGGAGTAATAGCTTAAACGGACCTCATGCTCGTGTAGAGTCTTCCAAAGATTCACTAGTGGTGAAAATAAGTGGGACAGAGCTTGTGGAAATGTTTTTAAATTCGGACAAATGGGTTGATCTATTTCCAACAATTGTTAAAAAGGCCCAAACAATTGAAGTACTCGAAAGTGGTTCGTTAGGAAACCGAAATGGAGCTTTGCAGTTGATGAATGCAGAAATGCACATTCTTTCACCTTTGGTTCCAACTCGGGAATTCCACTTCCTTCGTTATTGTAAACAAATTGAAGCAGGTGTATGGACCATAGGGGATGTGTCAGTTGATTCTTCCACACACAAAACCTCTACTGTTTCTAGCTCTCGGAGACTTCCATCTGGATTGCTGATTCAAGAAATGGCTGAGGGATTGAGCAGGGTTTCTTGGGTTGAGCACGTGGAAGTGGATGATAAGATCCAAACTCACCATCTCTTCAGAGATCTTATTTGTGGCAATAATGCATATGGAGCAGAAAGGTGGGTTTTGGCACTTGAAAGAATGTGTGAGAGGTTTGAAAGTGCCTCGGCTGAAACTATACCAAGTTGTGAGGCTGGAGGAGTGATTAGATCACCTGACTCAAGAAGGAATATAATGCGCCTGACTCGTCGTATGGTTAGATCTTTCTGTGGGAGTTTGTGCATGCAAGATAACACGAACTTCCCTCACCTAACGAGGATGAACAATGGTGGTATTAGAGTTGCCGTTCGAGTGAACATGACCGAGCCAGGTGAACCTAAAGGCATGATTATCAGTGCAGCTACCTCCTTTTGGCTTCCTCTCTCTCCACAACATGTTTTTGACTACCTGATAGATGACAGGAAACGAGCTAAGTGGGATGTTCTATGCTCTGGAAATGCAGGGCACGAGATTCAACGCATCACAACAGGGAGTAATCCTGGAAACTGTGTTTCAATCATGCGGCCTTTCGTCCCTAAAGAGAACAATATAGTGATTCTCCAAGAAAGTTATGTAGATGGTTTGGAATGTATGATGCTATACGCTCCCTTTGATATGAAGGCATTGAACTTCGTGATGAACGGAGAAGACACGTCGCTGTTTCCGATTCTTCCCTCTGGTTTCACCATATCTAGGAATGGCCAATCAGATGTTCCTGAAGGAGAATCTAGAGAAGTTGGCAAATCAGGAGGTTCGTTGGTGACTCTAATGTTTCAAATTTTGGCTTCTAGTTCATCTAGAATGAACATGGTAGACATTGAATTTGTAGGTAATGTTAATACACTTGTGACCTCAACTGTAGACAATATTAAAGATGCTTTGAATTGTTCCCATTACTAG 2280 0.4189 MSETLKTVACAPCGGRVMGPEERELYLQILKVENILLIKECERVVSFMANNGINPALLPAIPSSSSSSLDTLRASLLNQTVGTSRNQLIPNPDLYIPSPAHHNIPAVHQDIPTATPTLSQDIPILTHAHNQEIPAPALDQHVSTLTATSPATVDPFLSQDDSLLISCLEYNIPALVTALDQTIPTLASTHNQNNNVPVAEKQSEGPNPCVNTPSVSPTPDQDIPPPGQDISSVLQDHTPSLDLDLDAILKILNSDMVSQSATTENQDTENERMLKIANSAMEELMKLLSMNEPFWFRSLVDEKFILQRDCYQRIFRRSNSLNGPHARVESSKDSLVVKISGTELVEMFLNSDKWVDLFPTIVKKAQTIEVLESGSLGNRNGALQLMNAEMHILSPLVPTREFHFLRYCKQIEAGVWTIGDVSVDSSTHKTSTVSSSRRLPSGLLIQEMAEGLSRVSWVEHVEVDDKIQTHHLFRDLICGNNAYGAERWVLALERMCERFESASAETIPSCEAGGVIRSPDSRRNIMRLTRRMVRSFCGSLCMQDNTNFPHLTRMNNGGIRVAVRVNMTEPGEPKGMIISAATSFWLPLSPQHVFDYLIDDRKRAKWDVLCSGNAGHEIQRITTGSNPGNCVSIMRPFVPKENNIVILQESYVDGLECMMLYAPFDMKALNFVMNGEDTSLFPILPSGFTISRNGQSDVPEGESREVGKSGGSLVTLMFQILASSSSRMNMVDIEFVGNVNTLVTSTVDNIKDALNCSHY* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02694 759 Gene3D - 274 474 IPR023393 -
Lapu3g02694 759 ProSiteProfiles START domain profile. 266 501 IPR002913 GO:0008289
Lapu3g02694 759 CDD START_ArGLABRA2_like 272 497 - -
Lapu3g02694 759 SMART START_1 275 498 IPR002913 GO:0008289
Lapu3g02694 759 MobiDBLite consensus disorder prediction 190 234 - -
Lapu3g02694 759 SUPERFAMILY Bet v1-like 553 734 - -
Lapu3g02694 759 MobiDBLite consensus disorder prediction 190 217 - -
Lapu3g02694 759 Pfam START domain 276 498 IPR002913 GO:0008289
Lapu3g02694 759 SUPERFAMILY Bet v1-like 269 499 - -
Lapu3g02694 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 755 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02694 Lapu-Chr3 49582092 49589029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02694 273 756 Homeobox Transcription Factor Family AT1G17920 44.603 1.07e-131 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02694 K09338 - gmx:100783586 887.1