Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02680 ATGGTTTTTCCAAGACCTCCTTCTGAGTCTGACCTCTTTCTCCATTCCAACTTTGCTTCTCGATATGCAAGAGACTCTCTTCCTAGGTTCAGCATGCCCGAGGACTCCATGCCAAAGGAGGCTGCGTACCAGAACATCCACGATGAATTGCAACTCGATGCCATTCCAAAGCTTAACTTGGCTTCCTTTGTCACCACTTCCATGGAGGAAGAGTGCAACAAACTTATCATGGAATCCATCAACAAGAACTATGTTGACATGGACGAGTATCCTATCACCACAGACCTTCACAATCGATGTGTGAACATTATAGCTCGTTTGTTCCATGCTGAAATTGGAGAAAATGAGGATGCAGTTGGAGCAGGAACAGTGGGATCATCAGAGGCCATAATGCTGGCGGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGGAAGGCAGAGGGCAAGCCTTATGATAAGCCTAATTTGGTCACTGGTTCCAATGTGCAAGTATGTTGGGAGAAATTTGCGAGGTATTTTGAAGTGGAGCTGAGGGAAGTGGAGGTGAGAGAAGGATACTACGTGATGGACCCTGCCAAAGCGGTTGAGCTGGTTGATGAAAACACTATCTGCGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTTGAAGATGTGAAGCTCTTGAATGACTTGCTGCTACAAAAGAACAAGCAAACTGGATTGGATACACCTATTCATGTGGATGCTGCAAGTGGAGGGTTTATTGCTCCTTTCCTTTATCCAGAGCTGGAGTGGGATTTCAGACTGGAATTGGTGAAGAGCATAAATGTGAGTGGACACAAGTATGGGCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGACCAAGGACGACTTGCCACAAGACCTTGTCTTCCATATCAATTACCTTGGAGCTCACCAGCCCACCTTCACCCTCAATTTCTCCAAAGGTTCCAGTCAGATCATCGCTCAATATTATCAGCTAGTTCGTCTTGGCCAAGAGGGTTACCGGAGCATAATGGAGAACTGCAGAGAAAACACAACGGTGGTGAAGGAAGAATTGGAGAAGAGTGGACGGTTTAACATACTATCAAAAGATAAGGGTGTTCCAGTGGTGGCATTTTCTCTGAAAGACAGAAGGCAGTACGATGAGTACAAGATATCAGAGATGTTGAGGCGACACGGTTGGATCGTGCCAGCTTATCCAATGCCACCTGCTGCTCAGCACATCAATGTGCTCCGTGTGGTGATCAGGGCTGAGTTTTCACGCACCCTTGCTCAACGCCTTGTGTTGGACATACACAATGTGCTGCATGAGCTTGAAAAGGAGCATACCAATAACATTGTGGAAGAGAAGAAGGCCTTGGTTGATACTGAAGTCAAGAAAACTGCGATGGATGAACACAGGGAAGTCATTGTTCAAGCATCCAACAAGCGTCAGAAGATCATGGCTGCCTAG 1470 0.4633 MVFPRPPSESDLFLHSNFASRYARDSLPRFSMPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNIIARLFHAEIGENEDAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGLDTPIHVDAASGGFIAPFLYPELEWDFRLELVKSINVSGHKYGLVYAGIGWVIWRTKDDLPQDLVFHINYLGAHQPTFTLNFSKGSSQIIAQYYQLVRLGQEGYRSIMENCRENTTVVKEELEKSGRFNILSKDKGVPVVAFSLKDRRQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAQRLVLDIHNVLHELEKEHTNNIVEEKKALVDTEVKKTAMDEHREVIVQASNKRQKIMAA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02680 489 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lapu3g02680 489 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lapu3g02680 489 FunFam Glutamate decarboxylase 361 448 - -
Lapu3g02680 489 Gene3D - 66 360 IPR015421 GO:0003824
Lapu3g02680 489 PANTHER GLUTAMATE DECARBOXYLASE 10 478 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lapu3g02680 489 Gene3D - 1 65 - -
Lapu3g02680 489 SUPERFAMILY PLP-dependent transferases 16 447 IPR015424 -
Lapu3g02680 489 FunFam Glutamate decarboxylase 66 360 - -
Lapu3g02680 489 FunFam Glutamate decarboxylase 5 65 - -
Lapu3g02680 489 Gene3D - 361 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02680 Lapu-Chr3 49441432 49443501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02680 1 476 Calmodulin-binding Proteins AT5G17330 73.814 0.0 749