Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02679 ATGTTAGGGACTCTCTTCCCAGGTAGGTTCAGCATACCTGAGGACTCCATGCCCAAGGAGGCTGCTTACCAGAACATTCACGATGAGTTACAGCTTGATGCCATTCCCAAGCTCAATTTGGCTTCCTTCGTGACTACGTCCATGGAGGAAGAGTGCAACAAGCTAATCATGGAATCTATCAACAAGAACTATGTGGACATGGACGAATATCCTATCACCACTGATCTTCACAATCGGTGCCTGAACATGATAGCACGGTTATTCCATGCTGAAATTGGAGAAAATGAGGATGCAGTTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAAAAGAAGTGGCAGAACAAGCGGAAGGCAGAGGGCAAGCCTTATGATAAGCCTAATTTGGTCACTGGTTCCAATGTGCAAGTATGTTGGGAGAAATTTGCGAGGTATTTTGAAGTGGAGTTGAGGGAAGTGGAGGTGAGAGAAGGATACTACGTGATGGACCCTGCCAAAGCGGTTGAGCTGGTTGATGAAAACACTATCTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTTGAAGATGTGAAGCTCTTGAATGACTTGCTGCTACAAAAGAACAAGCAAACTGGGTAA 651 0.4608 MLGTLFPGRFSIPEDSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCLNMIARLFHAEIGENEDAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTG* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02679 216 Pfam Pyridoxal-dependent decarboxylase conserved domain 13 210 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lapu3g02679 216 SUPERFAMILY PLP-dependent transferases 9 215 IPR015424 -
Lapu3g02679 216 Gene3D - 7 45 - -
Lapu3g02679 216 Gene3D - 46 216 IPR015421 GO:0003824
Lapu3g02679 216 PANTHER GLUTAMATE DECARBOXYLASE 9 216 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02679 Lapu-Chr3 49435453 49436427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02679 9 216 Calmodulin-binding Proteins AT2G02010 80.288 1.37e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02679 K01580 - gmx:100781791 400.593