Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02674 ATGTCTTTGGCTGCTCCGAGTTCCCTTTTGAAGGTGGAGGAAATACAAGGAAGAGGGAGGGGAATGGTTGCATCTCAGCCTCTTAAAGCTGGTCAAATTGTCCTAAAAGACTCTCCCATTCTGCTGTATTCAGCTTTGCCCTTGATCAGACAGTCTTCGTCACCGTCATCCTCTTCCTCGACTTCATGCTTCTGTGATCACTGCTTCAGAACCTTGCCTCCATTTTTACAGGGAGATTCTTCATCATCCACAATTTTGTGCCCCAATTGTCACTACCATCGTTTCTGCAGCTCAAGTTGTCTTTCAAAGGCATTGAACTCCTCCCATTCATCTTGGGTATGTCAAGCGTTATCTAGTCTCAGAGCCAATTCTCTACTGCTTGAACAGCCCCTTGAGCGCCAAGTCCAGGCTAATTTTCTCATAGCTGCCTACAATCTTTCCAATGTTTCCCCTTCAGACTTCCAAGTTATGCTTTCTCTCCAGGGTTCTCCTGATGATACCATCATTGCCACAGCCCAGTTCCTACACCCTCTTATTTCATCTCTCTGCTCACTTTCTCTCATTAGTCCCCAGATTGAATTTTCTTTAGAACTCACTTCTGCACTTCTTGTCAAGGACAAGCTCAATGGCTTTGGAATAATGCAGCCCTTCTCTGCAGATGACGATCAGAGGTCTGTCAGAGCATATGGTATTTACCCCTATGCTTCCTTTTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGACAGCAATCCACATGAAGACTGCCATAATACTGACTTTATTATTAGGATGATTCATGATGTTCCCCAAGGTAGGGAGATCTGTTTGAGTTATTTCCCTGTGAATGAAAACTATTCTAGTAGACAAAAGAGATTGATTGAAGACTATGGCTTCTCCTGTAATTGTGATCGATGTAATGTGGAGTCAAATTGGTCAGATAATGATAGTGTTGAAGATAATGCTGAGGATGAAGAGGAGGTTATGGACGAGGACCAATATGAAATTATGGCAGCATCAGACACTGACAAACATGCCCTCGAAGACAATAATAATGATTTCCCTCATGCATATTTCTTTTTAAAATACATGTGTGATAGAACGAATTGCTGGGGAACATTAGCTCCATTACCTCCGCAGGGTGATACTCCATCTAATGTCATGGAATGCAATGCCTGTGGCAAATTGAAGAGTGACGATACCTTTGATATCGATGAAGGTGTTATGGAGGACTAA 1248 0.4271 MSLAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLKDSPILLYSALPLIRQSSSPSSSSSTSCFCDHCFRTLPPFLQGDSSSSTILCPNCHYHRFCSSSCLSKALNSSHSSWVCQALSSLRANSLLLEQPLERQVQANFLIAAYNLSNVSPSDFQVMLSLQGSPDDTIIATAQFLHPLISSLCSLSLISPQIEFSLELTSALLVKDKLNGFGIMQPFSADDDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDSNPHEDCHNTDFIIRMIHDVPQGREICLSYFPVNENYSSRQKRLIEDYGFSCNCDRCNVESNWSDNDSVEDNAEDEEEVMDEDQYEIMAASDTDKHALEDNNNDFPHAYFFLKYMCDRTNCWGTLAPLPPQGDTPSNVMECNACGKLKSDDTFDIDEGVMED* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02674 415 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 410 IPR044238 -
Lapu3g02674 415 CDD SET_SMYD 221 310 - -
Lapu3g02674 415 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Lapu3g02674 415 SMART set_7 8 290 IPR001214 GO:0005515
Lapu3g02674 415 Gene3D - 64 123 - -
Lapu3g02674 415 SUPERFAMILY SET domain 10 311 IPR046341 -
Lapu3g02674 415 Pfam SET domain 19 283 IPR001214 GO:0005515
Lapu3g02674 415 Gene3D SET domain 21 310 IPR046341 -
Lapu3g02674 415 Gene3D - 128 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02674 Lapu-Chr3 49383873 49388657 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu3g02674 SET 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02674 - - gmx:100783406 719.153