Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02669 ATGGAGAACAACCATGTTCAGCTTTTGCCTCATCTCACTGTGACACTTCTTGTGATCACTGTTTTGTTTCCTGTGGCTGAATGTGCGGCAGTTTCCTCCATCAAGACTGATGCGCAGGCTCTTCTCATGTTCAAAAGGATGATTCAGAAGGATCAAAGTGGAGTTTTATCAGGGTGGAAGCTGAATAAGAATCCATGCAGCTGGTATGGAGTCTCTTGCACCTTTGGAAGAGTTACTCAGCTTGATATTAGTGGGAATGATAACCTTGCTGGGACTATATCTCTTGACCCTTTGTCTTCTTTAGACATGTTATCTGTTCTGAAACTGTCTTTGAATAAATTTTCTGTAAATTCTACCTCTTTGCTTCAGCTCCCATATGGTTTGACTCAGCTTGATCTATCTTTTGGAGGAGTTACAGGCCCTGTCCCTGAGAACCTTTTCTCCAAGTGTCCAAATCTTGTTGTTGTTAATCTTTCATATAACAACTTAACAGGCCCTATTCCTGAAAATTTCCTCCAAAATTCTGATAAACTGCAGTCCCTTGACCTCTCTTTCAACAACCTGTCAGGGTCTATTTTTGGCCTGAAAATGGATTGCATTTCCTTGTTGCAACTTGATCTATCTGGAAACCGCTTGTCAGACTCAATTCCACTCTCTTTGTCAAACTGTACCAGCCTTAAAAGTTTGAATTTAGCTAACAATGTGATTTCTGGGGGAATTCCCAAAGCTTTGGGTCAGCTAAACAAACTACAGACCCTGGATCTTTCCCACAACCAACTCACAGGCTGGATCCCTTCTGAAATGGGAAATGCGTGTGCGTCCCTTTTAGAGGTTAAACTGTCTTTCAACAACATCTCCGGTTCACTCCCATCTGGTTTCTCCTCATGCACTTGGCTTCAACTTCTTGACATATCTAACAACAACCTGTCAGGACAGTTAGAAGATTCAATCTTTCGGAACCTTGGGTCATTGCAGGAACTGAGGCTGGGGAATAATGCTATCTCTGGTCAATTTCCATCATCAATATCTTCCTGCAAAAAGTTGAAGATTGCGGACTTCAGCTCAAACAAAATTTATGGATCTATCCCCAGGGATTTATGTCCAGGGGCAGCCTCACTTGAGGAGCTGAGAATGCCAGATAATCTTATTACAGGTGAAATACCAGCTGAACTGTCAAAGTGCTCACAGCTGAAGACACTTGATTTTAGTCTGAACTATCTCAATGGTACAATTCCTGATGAGCTTGGACAACTAGAAAATCTTGAGCAGCTAATAGCATGGTTCAATGGCTTGGAAGGGAAAATTCCAGCAAAGCTGGGCCAGTGCAAGAATCTTAAGGATCTCATACTGAATAATAATCATCTGACTGGAGGAATTCCCATTGAGTTATTCAATTGCAGCAATCTTGAATGGATATCACTGACAAGCAATGAGCTTAGTGGTGAAATACCGCGTGAGTTTGGTCTCTTGACAAGGTTAGCTGTTCTGCAGCTTGGAAACAACAGCTTGAGTGGCGAGATACCAGCAGAGCTAGCGAATTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAGGCTCACTGGAGAGATTCCTCCAAGACTTGGAAGACAGCTAGGAGCAAAATCCTTGTTTGGGATCCTTTCAGGGAACACTTTGGTGTTTGTAAGAAATATTGGAAACTCATGCAAAGGAGTTGGAGGTTTGCTAGAATTCTCCGGTATTCGACCTGAAAGACTCTTGCAGGTCCCAACATTGAGGACTTGTGACTTCACAAGACTCTATTCTGGTCCTGTCCTCAGCTTGTTCACCAAGTACCAGACTCTGGAGTATCTTGATCTTTCATATAACGAGCTTCGCGGAAAAATCCCAGATGAATTCGGAGACATGGTGGCTTTACAGGTTCTTGAATTATCTCACAATCAGCTATCTGGAGAAATCCCTTCAACACTTGGCCAGCTAAAAAATTTGGGTGTGTTTGATGCATCACACAATAGATTTCAGGGTCATATCCCAGACTCATTCTCAAACCTCTCATTCTTAGTGCAAATTGATCTCTCTAACAACGAGTTAACAGGGCAAATTCCATCTAGGGGACAACTGAGTACACTTCCAGCTTCCCAGTATGCAAATAACCCGGGCCTTTGTGGTGTACCATTGCCTGATTGCAAGAGTGACAACAGCCAACCCACAACAAATCCAACTGATGATGCTGGCAAAGGGGGGCATAAAACAGCAACTGCTACATGGGCAAACAGCATTGTCATGGGAATTCTCATCTCTGTTGCTTCTGTATGTATTTTAATTGTGTGGGCAATTGCAATGCGCGCAAGGAGGAAGGAGGCCGAAGAAGTAAAGATGCTCAATAGCTTACAAGCATGCCATGCTGCTACAACATGGAAAATTGACAAAGAGAAAGAGCCCCTAAGCATCAATGTTGCAACATTTCAGAGGCAGCTAAGGAAACTCAAGTTCTCCCAGCTTATTGAAGCAACTAATGGCTTCTCAGCAGAAAGCCTCATTGGGTGTGGTGGTTTTGGTGAAGTGTTCAAGGCCACACTCAAAGACGGCTCAAGTGTCGCCATAAAGAAGCTCATTCGACTGAGCTGCCAGGGTGATCGAGAATTCATGGCAGAGATGGAAACCTTGGGGAAGATCAAGCACAGAAATCTTGTTCCTCTGTTGGGGTACTGCAAAGTGGGGGAAGAGAGGCTCCTTGTTTATGAATACATGGAGTATGGAAGCCTAGAAGAGATGCTTCATGGGAGAATCAAGACTCGTGATCGCCGCATTTTGACATGGGAAGAAAGGAAAAAGATTGCAAGAGGTGCAGCTAAAGGGCTTTGTTTCCTGCACCACAATTGCATCCCTCACATCATACACAGAGATATGAAATCGAGCAATGTGCTCCTTGACCATGAAATGGAGTCCAGGGTCTCAGATTTTGGAATGGCAAGACTTATAAGTGCCCTTGATACACATCTTAGTGTTAGCACACTGGCAGGAACACCTGGATATGTTCCCCCAGAGTACTACCAAAGTTTCAGGTGCACTGCCAAGGGAGATGTCTACTCATTTGGAGTTGTGATGCTGGAACTGCTTAGTGGTAAACGCCCTACTGACAAGGAGGACTTCGGTGACACCAACTTGGTTGGGTGGGCCAAGATGAAGGTCCGTGAAGGGAAGCAAATGGAAGTGATTGACCCTGACTTGCTTTTGGCCACTCAAGGAACTGATGAGGCAGAAGCCAAAGAAGTGAAGGAGATGATAAGATATTTAGAGATAACTTTGCAGTGTGTTGATGACTTGCCTTCAAGAAGGCCAAACATGTTGCAGTGTTACTTTGTAACTCCACCCAATATTAACATTGCAGTAATTGCATATGAAAACAGAATCAATAGACGCGTTAAATTAACTAAGCCTGTCTGA 3429 0.4374 MENNHVQLLPHLTVTLLVITVLFPVAECAAVSSIKTDAQALLMFKRMIQKDQSGVLSGWKLNKNPCSWYGVSCTFGRVTQLDISGNDNLAGTISLDPLSSLDMLSVLKLSLNKFSVNSTSLLQLPYGLTQLDLSFGGVTGPVPENLFSKCPNLVVVNLSYNNLTGPIPENFLQNSDKLQSLDLSFNNLSGSIFGLKMDCISLLQLDLSGNRLSDSIPLSLSNCTSLKSLNLANNVISGGIPKALGQLNKLQTLDLSHNQLTGWIPSEMGNACASLLEVKLSFNNISGSLPSGFSSCTWLQLLDISNNNLSGQLEDSIFRNLGSLQELRLGNNAISGQFPSSISSCKKLKIADFSSNKIYGSIPRDLCPGAASLEELRMPDNLITGEIPAELSKCSQLKTLDFSLNYLNGTIPDELGQLENLEQLIAWFNGLEGKIPAKLGQCKNLKDLILNNNHLTGGIPIELFNCSNLEWISLTSNELSGEIPREFGLLTRLAVLQLGNNSLSGEIPAELANCSSLVWLDLNSNRLTGEIPPRLGRQLGAKSLFGILSGNTLVFVRNIGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGKIPDEFGDMVALQVLELSHNQLSGEIPSTLGQLKNLGVFDASHNRFQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPDCKSDNSQPTTNPTDDAGKGGHKTATATWANSIVMGILISVASVCILIVWAIAMRARRKEAEEVKMLNSLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDPDLLLATQGTDEAEAKEVKEMIRYLEITLQCVDDLPSRRPNMLQCYFVTPPNINIAVIAYENRINRRVKLTKPV* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02669 1142 FunFam Leucine-rich repeat receptor protein kinase EMS1 216 316 - -
Lapu3g02669 1142 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 299 1112 - -
Lapu3g02669 1142 Gene3D Phosphorylase Kinase; domain 1 795 910 - -
Lapu3g02669 1142 MobiDBLite consensus disorder prediction 722 743 - -
Lapu3g02669 1142 SUPERFAMILY Protein kinase-like (PK-like) 816 1114 IPR011009 -
Lapu3g02669 1142 PRINTS Leucine-rich repeat signature 178 191 - -
Lapu3g02669 1142 PRINTS Leucine-rich repeat signature 247 260 - -
Lapu3g02669 1142 ProSiteProfiles Protein kinase domain profile. 835 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02669 1142 SMART LRR_typ_2 199 223 IPR003591 -
Lapu3g02669 1142 SMART LRR_typ_2 515 538 IPR003591 -
Lapu3g02669 1142 SMART LRR_typ_2 150 174 IPR003591 -
Lapu3g02669 1142 SMART LRR_typ_2 321 345 IPR003591 -
Lapu3g02669 1142 SMART LRR_typ_2 630 654 IPR003591 -
Lapu3g02669 1142 SMART LRR_typ_2 247 271 IPR003591 -
Lapu3g02669 1142 SMART LRR_typ_2 442 466 IPR003591 -
Lapu3g02669 1142 SMART LRR_typ_2 490 514 IPR003591 -
Lapu3g02669 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 601 723 - -
Lapu3g02669 1142 ProSiteProfiles Leucine-rich repeat profile. 201 222 IPR001611 GO:0005515
Lapu3g02669 1142 Gene3D - 548 604 - -
Lapu3g02669 1142 Gene3D Ribonuclease Inhibitor 36 147 IPR032675 -
Lapu3g02669 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 959 971 IPR008271 GO:0004672|GO:0006468
Lapu3g02669 1142 ProSitePatterns Protein kinases ATP-binding region signature. 841 864 IPR017441 GO:0005524
Lapu3g02669 1142 Gene3D Transferase(Phosphotransferase) domain 1 911 1117 - -
Lapu3g02669 1142 Pfam Protein tyrosine and serine/threonine kinase 838 1113 IPR001245 GO:0004672|GO:0006468
Lapu3g02669 1142 FunFam serine/threonine-protein kinase BRI1-like 2 911 1117 - -
Lapu3g02669 1142 CDD STKc_IRAK 841 1112 - -
Lapu3g02669 1142 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Lapu3g02669 1142 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Lapu3g02669 1142 Pfam Leucine rich repeat 202 260 IPR001611 GO:0005515
Lapu3g02669 1142 Pfam Leucine rich repeat 602 643 IPR001611 GO:0005515
Lapu3g02669 1142 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 369 555 - -
Lapu3g02669 1142 FunFam serine/threonine-protein kinase BRI1-like 2 36 148 - -
Lapu3g02669 1142 Pfam Brassinosteroid receptor island domain 545 603 IPR045381 -
Lapu3g02669 1142 SMART serkin_6 835 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02669 1142 Gene3D Ribonuclease Inhibitor 174 723 IPR032675 -
Lapu3g02669 1142 MobiDBLite consensus disorder prediction 724 738 - -
Lapu3g02669 1142 SUPERFAMILY L domain-like 266 722 - -
Lapu3g02669 1142 SUPERFAMILY L domain-like 56 363 - -
Lapu3g02669 1142 FunFam serine/threonine-protein kinase BRI1-like 2 796 910 - -
Lapu3g02669 1142 Pfam BspA type Leucine rich repeat region (6 copies) 290 383 IPR026906 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02669 Lapu-Chr3 49273595 49277511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02669 41 1112 Receptor kinase-like Gene Family AT1G55610 49.551 0.0 1000
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lapu3g02669 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02669 - - gmx:100789959 2072.36