Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02651 ATGGCTGCACAAGAGCAGAAGATTTTTGCCTACGAAACCTTGGCTGCTGTTACCAAGAATTTTAGTGATATTCACAAGCTAGGCGAGGGAGGTTTTGGACCTGTCTACAAGGGGAAGCTGAATGATGGGAGAGAGATTGCTGTGAAGAAGTTATCACACACTTCAAATCAAGGGAAGAAAGAGTTCATGAATGAGGCCAAGTTATTGGCTCGTGTGCAGCATCGGAATGTGGTGAATTTGGTGGGCTATTGTGTCCATGGCACCGAAAAGCTACTTGTTTATGAGTATGTTGCTCATGAAAGCCTAGACAAGCTTCTTTTCAAATCACAAAAGAGAGAGATGCTTGATTGGAAACGCAGGTTGGGCATAATCACAGGCGTGGCAAAGGGGTTGCTTTATCTACACGAAGACTCACACAATTGCATCATCCATCGCGACATCAAGGCCAGTAATATCTTGCTTGATGACAAGTGGACGCCCAAGATTGCAGATTTTGGCATGGCCCGTCTCTTCCCCGAAGATCAAACCCAAGTCAATACACGTGTGGCTGGAACCAATGGATACATGGCTCCGGAATATGTTATGCACGGAAATCTATCGGTGAAGGCTGATGTATTTAGTTATGGAGTTTTGGTATTGGAGTTGATCACCGCCCACCGAAACTCCTCTTTCAATTTGGATGTGGACGCGCAGAATATGCTTGATTGGGCATACAAGATGTACAAGAAAGGGAAGAGCTTGGAAATTGTGGATTCGACGATAGCAGGTACGATGGTGGGTGAAGAGGTAGCGATGTGCATTCAGCTGGGTTTGTTGTGCACTCAAGGCGATCCTCAGCTTCGTCCCACGATGAGGCGCGTGGTGGTGATGCTGTCGAGGAAGCCAGGGCAGATGCAAGAACCAACCAGACCAGGAGTACCTGGTTCTAGATACCGAAGACCTCGAAGACACTCTGCATTGTCTTCCACATTGGGTATCTCTGGTGCCTCCGATTCACACACTTCTGATTCAAGTAATAATTATACCACTGTTACTACTACTGCCACAGGGACTACTACTGCCACAGGGACTACCTCTGCTACTGTTGAAACAGACCCCAAAGGGAAACGGCCAATGTGGGAGGGTTAG 1128 0.4725 MAAQEQKIFAYETLAAVTKNFSDIHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEAKLLARVQHRNVVNLVGYCVHGTEKLLVYEYVAHESLDKLLFKSQKREMLDWKRRLGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQTQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELITAHRNSSFNLDVDAQNMLDWAYKMYKKGKSLEIVDSTIAGTMVGEEVAMCIQLGLLCTQGDPQLRPTMRRVVVMLSRKPGQMQEPTRPGVPGSRYRRPRRHSALSSTLGISGASDSHTSDSSNNYTTVTTTATGTTTATGTTSATVETDPKGKRPMWEG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02651 375 Pfam Protein tyrosine and serine/threonine kinase 25 290 IPR001245 GO:0004672|GO:0006468
Lapu3g02651 375 CDD STKc_IRAK 27 293 - -
Lapu3g02651 375 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 346 - -
Lapu3g02651 375 MobiDBLite consensus disorder prediction 293 375 - -
Lapu3g02651 375 Gene3D Transferase(Phosphotransferase) domain 1 98 302 - -
Lapu3g02651 375 FunFam Cysteine-rich receptor-like protein kinase 10 98 303 - -
Lapu3g02651 375 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Lapu3g02651 375 MobiDBLite consensus disorder prediction 320 364 - -
Lapu3g02651 375 SUPERFAMILY Protein kinase-like (PK-like) 6 304 IPR011009 -
Lapu3g02651 375 ProSiteProfiles Protein kinase domain profile. 21 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g02651 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Lapu3g02651 375 FunFam Cysteine-rich receptor-like protein kinase 10 1 96 - -
Lapu3g02651 375 SMART serkin_6 21 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02651 Lapu-Chr3 49074407 49077923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02651 9 305 Receptor kinase-like Gene Family AT4G11530 51.839 2.08e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu3g02651 PK_Tyr_Ser-Thr 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02651 - - gmx:100795769 671.389