Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02606 ATGGAGTTAATATGCAGAGAAAGCATCAAACCCTCCACAGCCACCCCTCCCCACCTCACAAACTACCCACTCTGCTTCATCGACCACATCGTTTTCCGCAACTACATCCCATTACTTTTGTTTTACTCAGGAAACCACCATTCCAAGAACCACCAAGCATCCATAATATCAAAGCTCAAGAAATCCTTATCCCAAGTTTTGTCCCGATACTACCCTTTTGCCGGGAAGCTCAGAGACCAACTTTCCATCCAATGCAACGACCAAGGGGTGTCCTTTCTGGTCACAAGCTTCACATGCAACCTTTCATCCATCCTCCACAACCCCACCCAAGCATCGTTCAACCCTCTCTTCCCAGATCAACTGCAGTGGAAGCCCATGGAAACAGCTTCAACCATTGTAGCCATTCAGATAAACTGTTTTGCGTGCGGAGGAATCGCAATAAGCGTCTGCATGTGTCACAAAGTTGGCGACGCCGCCACACTTTCTAACTTCATCAATGACTGGGCCACATTCAACCGTCAAAACCAAAACCAACAAGAAGAGTTGTTGTTATCATCATTGCCCTTCCCAGTTCCTGGGGCTTCATTTTTGCCGCAAGAAAACTTGCCTGTTTTCCCGGAAGCTGCGTTCGTCAAAAACGACACCGTTTGCAGAAGGTTCGTCTTCGAGGCTGCTAAGATTGACTCGCTCAAAGCCATGGTGTCCTCCGGCAACGTGCACAACCCCACGCGCGTGGAAGTTGTCAGCGCGTTGATCTACCAGCGCGCGGTTCAATCGCTAGGGTTGACTTTCAAAACGACGTCGTTCCGCACCGCCGTGAACCTTCGCACCAGAACGGTTCCTCCGCTTCCTGAAAAAAGCTTGGGGAACCTGGTTTGGTTCCTCTTCGTGTCTGACCCGGGGGAAGAGACGGAGCTGCACGAGTTGGTGCTGAAAATGAAACACGGGTTGAGCGAGTTTTGTGACACATTTGGGAAGAAGTTTGGAGGGAAGAACAAGGACTCGCGGTTCATCTCGGAGTGTCTGAAGCAGGCTACTAGGGTTCCGGAGAGGGACGAGAGTTTGGTGTGTTTCGCGAGTTGGTGCAGGTTTCCGATTTACGAAGCGGATTTTGGGTGGGGGAAACCGGTGTGGTTCACCACAAGCGAGTGTCCTGTGAAGAATAGCATTGTTTTGATGGATACGAGAGACGGTGAAGGGATCGAAGCGCTTGTGAACATGGAGGAGCATGACATGGCCAAGTTCGAGCGTGATGTTCAGCTTCTTCAATATGCTTCTCTTAATCCATCAGTTGAA 1296 0.5015 MELICRESIKPSTATPPHLTNYPLCFIDHIVFRNYIPLLLFYSGNHHSKNHQASIISKLKKSLSQVLSRYYPFAGKLRDQLSIQCNDQGVSFLVTSFTCNLSSILHNPTQASFNPLFPDQLQWKPMETASTIVAIQINCFACGGIAISVCMCHKVGDAATLSNFINDWATFNRQNQNQQEELLLSSLPFPVPGASFLPQENLPVFPEAAFVKNDTVCRRFVFEAAKIDSLKAMVSSGNVHNPTRVEVVSALIYQRAVQSLGLTFKTTSFRTAVNLRTRTVPPLPEKSLGNLVWFLFVSDPGEETELHELVLKMKHGLSEFCDTFGKKFGGKNKDSRFISECLKQATRVPERDESLVCFASWCRFPIYEADFGWGKPVWFTTSECPVKNSIVLMDTRDGEGIEALVNMEEHDMAKFERDVQLLQYASLNPSVE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02606 432 Gene3D - 1 201 IPR023213 -
Lapu3g02606 432 PANTHER F21J9.9 2 426 - -
Lapu3g02606 432 Pfam Transferase family 2 420 - -
Lapu3g02606 432 Gene3D - 213 426 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02606 Lapu-Chr3 48415585 48416914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02606 1 417 Monolignol Biosynthesis Gene Families AT5G48930 22.637 2.57e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02606 - - vum:124841331 730.324